Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01570 ATGTTGATTACTCATCGCCACATAGCCCTTCTCTACCTCAAGGTCGTAACTTTCCGTGTAACATCACCAACCCCAAAACTTTACCCTCTTTTTCAGCACTACCCAACACCATTTTCTGGACGTTTCTGCACGGCTACTTCAGATTCACACTCATTTGCGGTGTCCTATCTCATCGACAATTTTGGGTTCTCACCAGATTCTGCTTCTAAAGCCTGCTACAACCACCATATTGGTTTCAAGACCACGGAAAACGCTGAATCAGTGCTCAGCTTCTTCAGAAACTACGGTTTCTCAAATTTCCAAATACATTGTATGGTTAGAAAGGCACCATGGCTACTTTCATGCGACCCCAGCAAAAGGGTCTTGCCCAAGTTTGAATTTTTGCTCTCCAAAGGTGCTTCTAGATCTGACATTGTTAACCTAGTGAGTAAGAACGCTAGAGTCCTGTATCCAAGCTTGAAGAATCAAATAATCCCAAACTATGAATTGGTGTATAGATTCTTGCAATCTGATAAGGACACTGTTGCTATTGTATTGTACAATCCAACTTTCCTTGGTCACCGTCGTCTGGCATCTAACATCAGAGTGCTGCTTGAGAATGGAGTGACAGAGACAAACATTGCAAGAATGCTTCGGACCTGGTGGAAGGTATTCACTTCGTCGAACATGCTGAAGGTGGTGGAGGAATTAAAGAATTTGGGGTTTGATCCTTCAAAATCAGCTTTCAGTGTGGCATTGCTTGCCAAAAAAGCTGTAAACAAAACCCTGTGGAATGAGAAAGTTGATGCCTTTAAGAAGTGGGGGTGGTCTGATGAAAACATTCTTGAAGCATTTAAAAGGCAGCCTCAGTGCATGTTAGCATCCATTGATAAAATAAATTTAGTGATGAATTTTTGGGTCAATCAGTTAGGTTGGGATGCTCTGGCAATTGTCAAAGGACCAAGGATTATTGGGTACAATTTGGAGAGAAGGGTCATTCCAAGGGCATCAGTTCTGCAATTTCTTCTGAACAAAGGTTTGCGAAAAAAGACTGCAAGCTTAATTAGTCCATTTATAATGCGTGAGGAGTTGTTCCTAAAGGACTTTATAAAACGTTTTAAGGAGGAGTCTTCTGATCTATTAAAGCTGTATGAGGAAAAACGGAATCTTGCATCCACCAGGGAGAACCCTGGCATGTCCTTCACCAAATATGTAACTTCTTAG 1203 0.4165 MLITHRHIALLYLKVVTFRVTSPTPKLYPLFQHYPTPFSGRFCTATSDSHSFAVSYLIDNFGFSPDSASKACYNHHIGFKTTENAESVLSFFRNYGFSNFQIHCMVRKAPWLLSCDPSKRVLPKFEFLLSKGASRSDIVNLVSKNARVLYPSLKNQIIPNYELVYRFLQSDKDTVAIVLYNPTFLGHRRLASNIRVLLENGVTETNIARMLRTWWKVFTSSNMLKVVEELKNLGFDPSKSAFSVALLAKKAVNKTLWNEKVDAFKKWGWSDENILEAFKRQPQCMLASIDKINLVMNFWVNQLGWDALAIVKGPRIIGYNLERRVIPRASVLQFLLNKGLRKKTASLISPFIMREELFLKDFIKRFKEESSDLLKLYEEKRNLASTRENPGMSFTKYVTS* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01570 400 PANTHER CGI-12 PROTEIN-RELATED 48 368 IPR003690 GO:0003690|GO:0006355
Rops11g01570 400 SMART mt_12 307 341 IPR003690 GO:0003690|GO:0006355
Rops11g01570 400 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Rops11g01570 400 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Rops11g01570 400 SMART mt_12 208 236 IPR003690 GO:0003690|GO:0006355
Rops11g01570 400 SMART mt_12 139 170 IPR003690 GO:0003690|GO:0006355
Rops11g01570 400 SMART mt_12 175 203 IPR003690 GO:0003690|GO:0006355
Rops11g01570 400 FunFam Mitochondrial transcription termination factor-like 153 370 - -
Rops11g01570 400 Gene3D Transcription termination factor 3, mitochondrial 152 376 IPR038538 -
Rops11g01570 400 Pfam mTERF 257 358 IPR003690 GO:0003690|GO:0006355
Rops11g01570 400 Pfam mTERF 89 236 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01570 Rops-Chr11 23969483 23970685 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops11g01570 mTERF 1.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01570 K15032 - mtr:25488156 475.322