Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01561 ATGCTTAGTCCTGAAGGTGAACTTGAAGTAAGTTTTGGCTATCAATGCAATAGCGATAGAGGCATCCCTTGCAAGGTTGCCAATCACTACAATATCCTTCCTGAAATCCCCAGAACAAGTAGTTTCACTTGCTTGTCTGGTGCTGCCTTAAGTGCAAATGCTACTCTAGCCAACACAAACATCTGCAATGGTGTGATAGGAGAAGAAATCCTTCCGAGTTTGGACTCTCCTAATTCATTTCGTAAGGTACCCTCTTCGCCAAGTCTTTCAAAGTTGGACATACTATCTTCTTCTCTCCATGGTTGTTTGTCAAACCTAAGTTGCAGCCCATCCACTCCAAGTAACATGCTTGAATATGACCCTTGTACGTTAAAATCCATGAGTTCTCCTTCCAGAAATGAAGGTTTTCTTAATGCTATGGAAGTACAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTCTTCTGTGCAATTTATGATGGATTTAATGGGAGAGATGCAGCCGACTTTCTGGCTGGCACCCTTTATGACACTATTGTATCTTATTTTAATATGACATATTGGGATTTGAAACCAGATTCCACCAAAGACTCTAATAATGTGAGTTTGGGTGGATCCTTTGAATATAAGTTGGATGACAGTCCTATTCTTCACGAGCATCAATCTCCGTCAGGACTTAAGGGAAACAACAGTTCTAGTCCTGGCTGTTCTGCAAACAGTAGCCCACCTGCCAAGTCTGAAGCATCACTGAAATCATTTTCGCATGCGGTACTTGATAGCCTCCAACATGTTCTTAGTCAGGCTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAGCGTCCAGATTTAGTTTCTATTGGATCTTGTGTTTTACTCATGCTTCTTCATGGGAATGATTTGTATACACTTAATCTAGGTGACAGCAGAGCAGTATTGGCAACACGCAGTACAGATGACAGAATTAATGGGAATGAAAGCTTGAATGCTATCCAGCTTACGGATAGTCACACTGTTGACAATGAAGCTGAAAGAGCTCAACTTCTTGCCAGTCATCCAGATGATCCAAAGACCATTGTAGCAGGGAAAGTGAAAGGAAAACTGAAGGTTACACGTGCTTTTGGAGTTGGCTACTTGAAGAAGAAAAATTTGAATGATGCATTGATGGGAATCCTTCGAGTTAGTGATCTTAAAAGCCCGCCATATATTTCAACTGATCCTTCACTGAATGTGCATAAAATCTCAAATTCTGATCAATTTGTTATAGTTGGGAGTGATGGTTTATTTGACTTCTTCACCAATGATGAAGCTGTAAAGCTTGTAGAGTCTTGTATCTTGAGCAATCCTTTTGGTGATCCAGCAAAATTTCTTATTGAGCAACTAGTATCAAGAGCAGCTGATTCTGCAGGTTTCAGCATGGAAGAGTTGATGAATATTCCAGCTGGGAGGAGGAGGAAGTACCATGATGATGTGACTGTAATTGTCATCATCCTTGGGATGAATCAAAGGACTTCAAAGGCATCAACTTGCAACTAA 1575 0.4108 MLSPEGELEVSFGYQCNSDRGIPCKVANHYNILPEIPRTSSFTCLSGAALSANATLANTNICNGVIGEEILPSLDSPNSFRKVPSSPSLSKLDILSSSLHGCLSNLSCSPSTPSNMLEYDPCTLKSMSSPSRNEGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIVSYFNMTYWDLKPDSTKDSNNVSLGGSFEYKLDDSPILHEHQSPSGLKGNNSSSPGCSANSSPPAKSEASLKSFSHAVLDSLQHVLSQAENDFLYMVEQEMEERPDLVSIGSCVLLMLLHGNDLYTLNLGDSRAVLATRSTDDRINGNESLNAIQLTDSHTVDNEAERAQLLASHPDDPKTIVAGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVSDLKSPPYISTDPSLNVHKISNSDQFVIVGSDGLFDFFTNDEAVKLVESCILSNPFGDPAKFLIEQLVSRAADSAGFSMEELMNIPAGRRRKYHDDVTVIVIILGMNQRTSKASTCN* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01561 524 MobiDBLite consensus disorder prediction 234 255 - -
Rops11g01561 524 CDD PP2Cc 149 511 IPR001932 -
Rops11g01561 524 MobiDBLite consensus disorder prediction 229 255 - -
Rops11g01561 524 SUPERFAMILY PP2C-like 149 512 IPR036457 -
Rops11g01561 524 PANTHER PROTEIN PHOSPHATASE 2C 144 509 IPR015655 GO:0004722|GO:0006470
Rops11g01561 524 Pfam Protein phosphatase 2C 271 476 IPR001932 -
Rops11g01561 524 Gene3D - 111 520 IPR036457 -
Rops11g01561 524 ProSiteProfiles PPM-type phosphatase domain profile. 136 511 IPR001932 -
Rops11g01561 524 SMART PP2C_4 127 509 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01561 Rops-Chr11 23821018 23825031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01561 4 522 PP2C-type Phosphatase Gene Family AT3G16560 62.857 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01561 - - gmx:100808304 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01561 11 23821018 23825031 Rops11g01561 11 23821018 23825031 ECH
Rops2g04877 2 88037582 88042099 Rops11g01561 11 23821018 23825031 PCT