Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01557 ATGGAGGATTCAACGGGGCAGAAAGGGGAGCAACGAGAGTTCGCTTTGGCACGTGTGGGTGAGCTGTCTTCGGCTTCTGGTTCCTCTTTGCAGGGAATTGCTCGCTTCACCCGTGACGCTCTGCAAATTGAGCATGAATCTCACCAGATTTTGTTCAATGTTCATCTTCCAGCTGTTCAGGTATTCAGGTTAGGTCCTGTACAATCGGTTTGCATGGTGGAAGGGTCTGATGCTGGAAAACAGACTTCGTATTCAAGGGGAGTTGCTATACAGTTTAGAAATGAGGAAGATAGTGAGGCCTTCCATTGTGTATTCCAACAATGGAAGAAGGAATTCAATGTTCAAGGTGGAAACTTACCAAATGGAACTAACGGAATAACTTCTAAAAGCAAATTTGATGAAAAGATAGAGTCATCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTGCATCAGCAAAATATGTTGCAGGACTTTGTGAGGACAGGAACCTATTATGCTGCTGTAATTGAGAATTGCACCGATTTCTTAGGACGTGTTGTAGTTGATGTTGGTGCTGGTAGTGGTATTTTGTCATTATTTGCTGCTCAGGCAGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCAAGGAAACTTATAGCTGGGAACCCAATACTGGGTCAACGAATTACAGTTATTAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCAGATATTCTGATCTCTGAGCCCATGGGCACCTTGTTAGTTAATGAAAGAATGCTGGAGTCTTATGTCATTGCTAGAGATAGGTTTCTCACCCCTAATGGGAAAATGTTTCCTACAGTGGGAAGGATTCACATGGCACCTTTCAGCGATGAATATTTGTTTGTTGAAATTGCTAATAAGTCACTGTTCTGGCAGCAACAAAACTATCATGGTGTTGATTTGACGCCCTTACACGGGACTGCCTTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGGTTGTTAATAGCTCCTTCTATGTTCCACGTGATAGACTTTACCAAAATAAAGGAAGAAGAGCTGTATGAAATTGACATTCCTCTTAGATTTATAGCCAATGTGGGTGCCAGAGTACATGGGTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGCACTGTGAAAAGATGGCTTACCACTGCCCCTGGTTCACCGATAACTCATTGGTATCAGTTACGCTGTGTTCTCTCCCAGCCAATTTATGTCATGGCAGGACAAGAAATTACTGGCAGGCTACACTTGATTGCCCACAATGCTCAGAGTTATACAATCTATTTAACTTTGTCAGCTAAAATGTGGGGGCCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCATCTGGCAAACTTGATCTGAAAGAACCCTACTATAGAATGTCTCAACCGCAAACTTATACATTAAACCAAGATCAGCAACCTCAACAACCTTTACAGACACAGGATGTGCACATCAAATCTCAGGATTTGGATGAAAGTGAGATGATGCAACAGCCTTCGCCTAATTCATGTGCTCAGATTGACTCACTCATGCAGAATTCATAA 1611 0.4209 MEDSTGQKGEQREFALARVGELSSASGSSLQGIARFTRDALQIEHESHQILFNVHLPAVQVFRLGPVQSVCMVEGSDAGKQTSYSRGVAIQFRNEEDSEAFHCVFQQWKKEFNVQGGNLPNGTNGITSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDFVRTGTYYAAVIENCTDFLGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPILGQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPNGKMFPTVGRIHMAPFSDEYLFVEIANKSLFWQQQNYHGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPSMFHVIDFTKIKEEELYEIDIPLRFIANVGARVHGLACWFDVLFNGSTVKRWLTTAPGSPITHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSGKLDLKEPYYRMSQPQTYTLNQDQQPQQPLQTQDVHIKSQDLDESEMMQQPSPNSCAQIDSLMQNS* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01557 536 Gene3D - 286 494 - -
Rops11g01557 536 MobiDBLite consensus disorder prediction 489 506 - -
Rops11g01557 536 FunFam Probable histone-arginine methyltransferase CARM1 286 493 - -
Rops11g01557 536 Gene3D Vaccinia Virus protein VP39 123 284 IPR029063 -
Rops11g01557 536 MobiDBLite consensus disorder prediction 489 536 - -
Rops11g01557 536 FunFam Probable histone-arginine methyltransferase CARM1 124 284 - -
Rops11g01557 536 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 147 458 IPR029063 -
Rops11g01557 536 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 137 452 IPR025799 GO:0016274|GO:0018216
Rops11g01557 536 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 113 465 IPR025799 GO:0016274|GO:0018216
Rops11g01557 536 MobiDBLite consensus disorder prediction 514 536 - -
Rops11g01557 536 CDD AdoMet_MTases 183 286 - -
Rops11g01557 536 Pfam Ribosomal protein L11 methyltransferase (PrmA) 181 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01557 Rops-Chr11 23750576 23758788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01557 144 433 C2H2 Transcription Factor Family AT3G12270 33.117 3.79e-38 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01557 K05931 - gmx:100818828 918.687