Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01549 ATGGAAGGTAACAAGGACGAAGCATTGAGATGTATTCGAATCGCTGAGGAAGCGATTGCATCGGGAAACAAAGATCGCGCTCTCAAATTCATCAAAATCGCGCAACGTCTCAACCGTGATTTTCCGGTTGAATCGTTGCTTAGTATGTGCGAACGTCTCGATTCTCAGTCCTCGGCGTCGTCCTCCGACGGAAATTCCACCACCGGAGCAGCCGCCAAGGCGGCGAACGATCCGGGGAGAAAAAGCAAGGATGAGGGTTTGAACGGAGAGAGGAATTACACGGAAGAGAATGTTCAATTGGTTAGGGAAATTAAGAAAAAGAGCGATTACTATGCGATTCTTGGCTTAGAGAAGAGTTGTTCAGTTGAAGAGATTCGTAAGGCTTATAGGAAATTATCCTTGAAGGTTCATCCCGATAAGAACAAGGCGCCGGGTTCCGAAGATGCGTTCAAGAAGGTTTCAAAGGCTTTTAAATGTTTGAGTGATGATGGTTTGAGGAGACAGTATGATCAAACAGGATTGGTTGATGATTTTGATTTCAACAACCAGCCGAACATTTATAGGCCCCGGAGGAGAAGGACAACGACAATGTCCCATGATATTTTCGAAGATGAGTTTGACCCTGATGAGATATTTAGGGCATTTTTCGGAAATTCAGATGTGTTTGGGAGGAGGACTCATGTTTATAGGACTCCTGGGACGGGTAGTAATCATCATAGGAATGAGTTTCAGGGTGGAGGAGGGCATAATAATATTTTGTTGTTGATTCAGCTTTTGCCATTCTTGATTATTTTGCTGCTTGCTTACTTGCCCTTTTCGGAGCCAGATTATTCTTTGCATAAGAATTACTCATACCAGATTTCGAAGACTACTGAGCAATATGGGGTTCAGTTTTATGTGAAATCTTATGCATTCGATGCTAAATATCCGCAGGGAAGTCCTGCTCGTGAAGCTATTGAGGACACTGTCATAAAGGATTATAGGAATATGCTTCGTCGTTATTGTCAGGTAGAGGTTCAGAGGCGTAGTTGGAATAGGAATCTGCCTGCTCCTCATTGTGAGAAGCTACAAAACTTTGGAGTTGTAGCCTGA 1092 0.4359 MEGNKDEALRCIRIAEEAIASGNKDRALKFIKIAQRLNRDFPVESLLSMCERLDSQSSASSSDGNSTTGAAAKAANDPGRKSKDEGLNGERNYTEENVQLVREIKKKSDYYAILGLEKSCSVEEIRKAYRKLSLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDGLRRQYDQTGLVDDFDFNNQPNIYRPRRRRTTTMSHDIFEDEFDPDEIFRAFFGNSDVFGRRTHVYRTPGTGSNHHRNEFQGGGGHNNILLLIQLLPFLIILLLAYLPFSEPDYSLHKNYSYQISKTTEQYGVQFYVKSYAFDAKYPQGSPAREAIEDTVIKDYRNMLRRYCQVEVQRRSWNRNLPAPHCEKLQNFGVVA* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01549 363 SMART dnaj_3 108 165 IPR001623 -
Rops11g01549 363 CDD DnaJ 109 162 IPR001623 -
Rops11g01549 363 PANTHER AT29763P-RELATED 1 358 - -
Rops11g01549 363 MobiDBLite consensus disorder prediction 77 91 - -
Rops11g01549 363 Gene3D DnaJ domain 105 227 IPR036869 -
Rops11g01549 363 Pfam DnaJ domain 109 170 IPR001623 -
Rops11g01549 363 MobiDBLite consensus disorder prediction 56 72 - -
Rops11g01549 363 ProSiteProfiles dnaJ domain profile. 109 173 IPR001623 -
Rops11g01549 363 Pfam Domain of unknown function (DUF1977) 273 343 IPR015399 -
Rops11g01549 363 MobiDBLite consensus disorder prediction 56 91 - -
Rops11g01549 363 PRINTS DnaJ domain signature 111 129 IPR001623 -
Rops11g01549 363 PRINTS DnaJ domain signature 129 144 IPR001623 -
Rops11g01549 363 PRINTS DnaJ domain signature 145 165 IPR001623 -
Rops11g01549 363 SUPERFAMILY Chaperone J-domain 104 176 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01549 Rops-Chr11 23615508 23621377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01549 104 170 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.028 1.02e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01549 K09518 - gmx:100820432 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01549 11 23615508 23621377 Rops11g01549 11 23615508 23621377 ECH