Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01528 ATGGAGCACCTTATATTTCTTGCGGAGGTGCCACTCAATCCCGAGGCCAACAAGGAGAAGGTGACCCAAGTTACGTTCGAGACTTTCAATGTGCCTGCCATGTATGTTGCGGTTCAGGCTGTCTTGTCTCTGTATGCCAATGGACGCACTACAGGAGTTTTGAGAAGTTCCCTAGAAAGCAAAGATATATTGGGAGATGGTTATGAAAGTGATGTTCTTGGGGAGTCCACGCCAGATGCTGTAATCAGTGGGTTTATGAAAGGTGAGAAAGAGCTTATTGAGGAGTTGTTGCAAACTGAAATAAATATGTCCCGCTGGGAGTGCTCTCATGCAGCATATGGAGGATTTCTAGAGAATGTAAGATCAAATTACCAAGCTGTCTCAAGACCAGAACAAGATGAGGCCAGCAAGGGTTCATTGTCGCGAGGCCCCGTGGCCGAGTTTCATGCACAAACTCTTTTCTTTCCAGCCCCCACCGACCCCATCAGCCGTCACCACGGTGAGCCCACCCGCACCAAGACTGGGCCAAGATACCCTCTATGTTCAATCACAACGCCAATTCTACCGTGGATCGCACCAGCCTCGGCACCATTGACTTTGTCTTCGTTGATGCAGTTGGAGTTTTCCGTAACGCGAGCTGATTGTGAAGGAACCCATGGAGAATCAACAATGCATGGTGACAGGGGCCAAAGCCTACGGCCTAGTGCACTTGTGTTCGGAGTTGCCACTTCGCAGGGGAACCCTCTTGAACCCCAAGGTAGCGTGTCTTGGAAGGCCACGGAGGGTGTATTCCAAGGGAGGTCTTATGGACTCGCTAGTTCGACTCAACGTGATGCTTGGATTGTCGAGTCTGGGGTCCCTTACGTTCTAGGATTCCTTCCCAACCTTCTCGTCCCAACAAAGTCGCTGACATCGTTGATAACAAGGACGCCGTTTCCAGGCTCCAAGTCACTGCTCGTGCTGGATGAATCTGACTGCATGGCATCGGGAGCACAGCAAGCTTTGAGAAGGACAATGGAGATATATTCTAATTCTGTTTGTTTTGCTCTCGTTTGCAATACATCTCCTAAGATCATTGAACCGATTCAGAGCAGATGTGCCATTGTGCGGGTTTCACGCTTATCTGATCAAGAGATATCGGATCGCCTCATGGTTGTGGTTCAAGCAGAGAAGGATCATTTTCACCGCTGA 1191 0.4954 MEHLIFLAEVPLNPEANKEKVTQVTFETFNVPAMYVAVQAVLSLYANGRTTGVLRSSLESKDILGDGYESDVLGESTPDAVISGFMKGEKELIEELLQTEINMSRWECSHAAYGGFLENVRSNYQAVSRPEQDEASKGSLSRGPVAEFHAQTLFFPAPTDPISRHHGEPTRTKTGPRYPLCSITTPILPWIAPASAPLTLSSLMQLEFSVTRADCEGTHGESTMHGDRGQSLRPSALVFGVATSQGNPLEPQGSVSWKATEGVFQGRSYGLASSTQRDAWIVESGVPYVLGFLPNLLVPTKSLTSLITRTPFPGSKSLLVLDESDCMASGAQQALRRTMEIYSNSVCFALVCNTSPKIIEPIQSRCAIVRVSRLSDQEISDRLMVVVQAEKDHFHR* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01528 396 Gene3D - 299 372 IPR027417 -
Rops11g01528 396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 303 392 IPR027417 -
Rops11g01528 396 SUPERFAMILY Actin-like ATPase domain 2 53 IPR043129 -
Rops11g01528 396 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 311 392 - -
Rops11g01528 396 PRINTS Actin signature 17 30 IPR004000 -
Rops11g01528 396 PRINTS Actin signature 42 61 IPR004000 -
Rops11g01528 396 Gene3D - 1 70 - -
Rops11g01528 396 MobiDBLite consensus disorder prediction 157 178 - -
Rops11g01528 396 Pfam Actin 2 54 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01528 Rops-Chr11 23203326 23205063 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01528 313 391 Core DNA Replication Machinery Family AT1G63160 73.418 1.77e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01528 K10755 - pvy:116109655 121.324