Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01527 ATGGAGCACCTTATATTTCTTGCGGAGGTGCCACTCAATCCCGAGGCCAACAAGGAGAAGGTGACCCAAGTTACGTTCGAGACTTTCAATGTGCCTGCCATGTATGTTGCGGTTCAGGCTGTCTTGTCTCTCAGATGCCAATGGACGCACTACAGGAGTTTTGAGAAGTTCCTAGAAAGCAAAGATATATTGGGAGATGGTTATGAAAGTGATGTTCTTGGGGAGTCCACGCCAGATGCTGTAATCAATGGGTTTATGAAAGGTGAGAAAGAGCTTATTGAGGAGTTGTTGCAAACTGAAATAAATATGTCCCGCTGGGAGTGCTCTCATGCAAAGATATGGAGGATTTCTAGAGAATGTAAGATCAAATTACCAAGTCTGTCTCAAGACCGTAACAAGATGAGGCCAAAGAAGGGTTCATTGTCGCGAGGCCTCGTAGCCGAGTTTCATGCACAAACTCTTTTCTTTCCAGCCCCACCGACCCCATCACCGTCACCACAGTGA 504 0.4643 MEHLIFLAEVPLNPEANKEKVTQVTFETFNVPAMYVAVQAVLSLRCQWTHYRSFEKFLESKDILGDGYESDVLGESTPDAVINGFMKGEKELIEELLQTEINMSRWECSHAKIWRISRECKIKLPSLSQDRNKMRPKKGSLSRGLVAEFHAQTLFFPAPPTPSPSPQ* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01527 167 Pfam Actin 2 44 IPR004000 -
Rops11g01527 167 SUPERFAMILY Actin-like ATPase domain 2 45 IPR043129 -
Rops11g01527 167 Gene3D - 1 70 - -
Rops11g01527 167 PANTHER OS04G0509100 PROTEIN 54 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01527 Rops-Chr11 23186864 23187565 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01527 2 130 Cytoskeleton Gene Families AT5G09810 39.394 2.45e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01527 K10355 - gmx:100777995 81.2629