Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01526 ATGGATGGGTTCCAGGATACCCTCTATGTTCAATCACAACGCCAATTCTACCGTGACTGCACCATCTCTGGCACCATTGACTTTGTCTTCGTTGATGCAGTTGGAGTTTTCCAGAACCGCGAGCTGATTGTGAAGGAACCCATGGAGAATCAACAATGCATGGTGACAGGGCCAAAGCCTACAGCCCTAGTGCACTTGTGTTCCGGAGTTGCCACTTCGCAGGGGAACCCTCTTGAACCCCAAGGGGGATACATGCCCTGGATAGGAAGTACTTTCAAGGAAACATGCACCTATTATGAATACAACAACAAGAGACCTGGTGCTAACACTGTTGCTAGAGTCACATGGCCAGGTGTTAAAACCGTAACACCTTTTGAGGCTGCTGATTATTATCCAGGGAGGTCTTATGGACTCGCTAATTCGACTCAACGTGATGCTTGGATTGTCGAGTCTGGGGTCCCTTACGTTCTAGGATTCCTTCCCAACCTTCTCGTCCCAACAAAGTCGCTGACATCGTTGATAACAAGGACGCCGTTTCCAGGCTCCAAGTCACTGCTCGTGCTGGATGAATCTGACTGCATGGCATCGGGAGCACAGCAAGCTTTGAGAAGGACAATGGAGATATATTCTAATTCTGTTTGTTTTGCTCTCGTTTGCAATACATCTCCTAAGATCATTGAACCGATTCAGAGCAGATGTGCCATTGTGCGGGTTTCACGCTTATCTGATCAAGAGATATCGGATCGCCTCATGGTTGTGGTTCAAGCAGAGAAGGATCATTTTCACCGCTGA 792 0.4798 MDGFQDTLYVQSQRQFYRDCTISGTIDFVFVDAVGVFQNRELIVKEPMENQQCMVTGPKPTALVHLCSGVATSQGNPLEPQGGYMPWIGSTFKETCTYYEYNNKRPGANTVARVTWPGVKTVTPFEAADYYPGRSYGLANSTQRDAWIVESGVPYVLGFLPNLLVPTKSLTSLITRTPFPGSKSLLVLDESDCMASGAQQALRRTMEIYSNSVCFALVCNTSPKIIEPIQSRCAIVRVSRLSDQEISDRLMVVVQAEKDHFHR* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01526 263 Pfam Pectinesterase 1 57 IPR000070 GO:0030599|GO:0042545
Rops11g01526 263 Pfam Pectinesterase 79 131 IPR000070 GO:0030599|GO:0042545
Rops11g01526 263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 259 IPR027417 -
Rops11g01526 263 PANTHER PECTINESTERASE 1 148 - -
Rops11g01526 263 Pfam DNA polymerase III, delta subunit 169 241 - -
Rops11g01526 263 Gene3D - 1 159 IPR012334 -
Rops11g01526 263 SUPERFAMILY Pectin lyase-like 2 155 IPR011050 -
Rops11g01526 263 Gene3D - 166 239 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01526 Rops-Chr11 23185826 23186699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01526 180 258 Core DNA Replication Machinery Family AT1G63160 73.418 1.19e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01526 K01051 - gmx:100800194 204.912