Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01521 ATGGCGACCGAGAAGTTAATGACCGGAGGCGGTCCACGCTACCTTCAAATGAAATCGTCGCCGCCACCATCGCCTCCGGAGGCGGGGGAGATTTCGCCGGCACCGTCGTTCCGGCAAGGCTGCGCTGAGGCCAATCGGATTTTCGATGAATTGCCGAAAGCCTCCATCGTCTCCGTCTCTCGCCCCGACGCCAGCGACATCAGCCCCATGCAACTCTCTTACACCATTCAGGTTCAGTACAAACAGTTCAAATGGGAGCTAGTGAAGAAAGCTCATCAAGTATTTATTTTGCATTTTGCGTTAAAGAAACGTGCCTTTATTGAGGAAATTAATGAGATGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAACACACTTCTGTGGTGCAAGATGACGATGAAGCTGATGATGAACCAGTTCCTTTACATACTGATGAAAGTGCTAAAGACAGCAGGGATGTTCCATCTAGTGCTGCTCTACCAATTATACGGCCAGCTTTAGGAAGACAACATTCTATTGCAGACAGGGCAAAGATTGCCATGCAAGGGTATCTGAATCACTTTTTGGGAAATATTAGTATTGTTAACTCTCCAGAGGTTTGCAAGTTTTTGGAGGTATCAATGTTATCTTTTTCACCTGAATATGGCCCTAAGCTGAAGGAAGAATATGTGATGGTGAAGCATCTGCCTAAAATTCCAAAGGATGATGTTTCCAGAAAGTGTTGTTTGTCTGGCTGTTTTAGTTGTTGTAATGACAACTGGCAAAAGGTGTGGGCTGTACTAAAACCTGGATTCTTGGCATTGCTGGCAGATCCTTTTGATACGCAGCCCTTGGATATTATTGTTTTTGATGTACTGCCTGCCCCAGAGGGGAATGGGGATGGTCGTCTATCACTAGCAAGTGAAATGAAGGAACGGAATCCTTTACGCCATTCATTCAAGGTGACTTGTGGAATCCGGAGCATTAGAATTAGAGTGAAAAGTAGTAGTAAAGTTAAAGATTGGGTCGCTGCAATTAATGATGCTGGACTCAGGCCTCCTGAAGGCTGGTGTCATCCTCACCGCTATGGCTCTTTTGCTCCTCCAAGAGGCTTAATCGAAGATGGCAGTCAAGCCCAGTGGTTCATAGATGGGCAAGCAGCATTTGAGGCCATTGCTTCTTCGATTGAGGATGCAAAATCAGAGATATTTATCTGTGGGTGGTGGCTGTGCCCAGAATTGTATCTACGGCGACCTTTCCACACTTATGTTTCATCAAGGCTTGATCATTTGTTGGAAGCAAAAGCTAAGCAAGGGGTTCAGATTTACATTCTTCTTTACAAAGAGGTGGCTCTTGCCTTGAAAATCAACAGTGTTTATAGCAAGACAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGATCACTTTTCTAGTGGTGTTTACCTATGGTCGCACCATGAAAAAATTGTCATTGTTGATAACCATATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACACCTGAGCATAAAGTGGGGGATTTCTGTCCTCTAATCTGGCCTGGAAAGGACTATTATAACCCAAGAGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTGGAACGTGAAAGATATCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCCAAGAGGAACAAAGCTCCATATGAGCAAGCAATACCATTACTTATGCCTCAGCAGCATATGGTTATTCCACATTACTTGGGAAAAAGCGGCGAGATACAGATTGAAAGCAAGAACACTGACAATCATAGAGTCATCAAGAGGGAAGATTCATTTTCCTCATCTTCCCAAGACCAAGATATTCCTCTCCTTTTGCCTCAGGAGTCTGACGGGTTGGATACTCATGAAGGAGAGCCAAAATCGAATGGCCTGGTCTCCTTTTTACATCACCTTGACAAGCCAAGAAGGATCGGCAGAGGTCTTCCTTTCTCATTCCGAAAGGCCAAAATTGCAGCAGTTGATCCAGATACACCAATGAAGGGCTTTGTAGATGATCTTGACTCTCTTCATTATCATGAAAAAATGTCTCTGGATAGAGTGGCTCATGTTGATTTACAAGATACAGATCCAGAATGGTGGGAAACACAAGAACGAGGTGATCAGGGAGGTTTTGCTGATGAATCAGGACAGACTGGTCCACGTACTTCCTGCCGTTGTCAGGTTATTAGAAGCGTCAGTCAATGGTCTGCTGGAACAAGCCAAACTGAAGAGAGCATCCACAATGCTTATTGCTCTCTTATTGAGAAAGCTGAATATTTCATCTACATTGAGAATCAGTTTTTTATCTCAGGTCTTTCTGGAGATGAGATGATACGTAATCGTGTGTTAGAAGCCTTATATCGAAGGATTATGCGAGCTTACAATGACAAAAAAACTTTCAGGGTTATAGTTGTCATACCTCTCCTTCCTGGCTTCCAGGGGGGCCTTGATGATAGTGGTGCAGCGTCTGTGAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGGAAAAATTCTATCTTGCATAATCTTTATGAACTTCTTGGTTCTAGAATACATGACTACATCTCTTTTTACGGCCTGAGGTCTTATGGTAGACTCTCTGATGGTGGTCCTGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGATTGTATCAGTTTGATTGGATCTGCTAATATTAATGATAGGAGCTTACTCGGCTCCAGAGATTCTGAGATTGGTTTAGTTATAGAAGACAGAGAGTTGATTGATTCTTATATGGATGGAAAGCCTTGGAAAGCAGGGAAGTTTTCTTTGACTCTCCGATTGTCATTATGGTCTGAGCACTTAGGTCTCTCGGCAGGAGAGGTCAATCAAATAATGGACCCAGTTGTTGAGTCTACTTACAAGAGTATTTGGATGACAATATCGAAGACGAATACTGCAATTTATCAGGATGTCTTTTCTTGCGTCCCTAATGATCTGATACACACCAGACTTGCTTTCAGACAAAGCATGGCTTTTTGGAAAGAAAGAATTGGTCACACGACTATTGATTTAGGAATAGCCCCAGAAAAATTAGAATCCTATCAAGATGGAGATATCAAGAACACCGATCCCTTGGACAGATTAGCATCAGTGAGGGGTCATCTTGTTTCTTTTCCCTTAGAGTTCATGTGTCAAGAAAGTCTAAGACCTGCTTTTAATGAAAGTGAATACTACGCTTCTCAAGTTTTCCATTGA 3360 0.4295 MATEKLMTGGGPRYLQMKSSPPPSPPEAGEISPAPSFRQGCAEANRIFDELPKASIVSVSRPDASDISPMQLSYTIQVQYKQFKWELVKKAHQVFILHFALKKRAFIEEINEMQEQVKEWLQNLGIGEHTSVVQDDDEADDEPVPLHTDESAKDSRDVPSSAALPIIRPALGRQHSIADRAKIAMQGYLNHFLGNISIVNSPEVCKFLEVSMLSFSPEYGPKLKEEYVMVKHLPKIPKDDVSRKCCLSGCFSCCNDNWQKVWAVLKPGFLALLADPFDTQPLDIIVFDVLPAPEGNGDGRLSLASEMKERNPLRHSFKVTCGIRSIRIRVKSSSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLIEDGSQAQWFIDGQAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHTYVSSRLDHLLEAKAKQGVQIYILLYKEVALALKINSVYSKTKLLSIHENVRVLRYPDHFSSGVYLWSHHEKIVIVDNHICFIGGLDLCFGRYDTPEHKVGDFCPLIWPGKDYYNPRESEPNSWEDTMKDELERERYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQQHMVIPHYLGKSGEIQIESKNTDNHRVIKREDSFSSSSQDQDIPLLLPQESDGLDTHEGEPKSNGLVSFLHHLDKPRRIGRGLPFSFRKAKIAAVDPDTPMKGFVDDLDSLHYHEKMSLDRVAHVDLQDTDPEWWETQERGDQGGFADESGQTGPRTSCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKAEYFIYIENQFFISGLSGDEMIRNRVLEALYRRIMRAYNDKKTFRVIVVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGKNSILHNLYELLGSRIHDYISFYGLRSYGRLSDGGPVATSQVYVHSKIMIVDDCISLIGSANINDRSLLGSRDSEIGLVIEDRELIDSYMDGKPWKAGKFSLTLRLSLWSEHLGLSAGEVNQIMDPVVESTYKSIWMTISKTNTAIYQDVFSCVPNDLIHTRLAFRQSMAFWKERIGHTTIDLGIAPEKLESYQDGDIKNTDPLDRLASVRGHLVSFPLEFMCQESLRPAFNESEYYASQVFH* 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01521 1119 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 483 510 IPR001736 GO:0003824
Rops11g01521 1119 FunFam Phospholipase 750 970 - -
Rops11g01521 1119 CDD PH_PLD 199 346 - -
Rops11g01521 1119 SMART pld_4 916 943 IPR001736 GO:0003824
Rops11g01521 1119 SMART pld_4 483 510 IPR001736 GO:0003824
Rops11g01521 1119 Gene3D - 251 348 IPR011993 -
Rops11g01521 1119 Pfam Phospholipase D Active site motif 483 510 IPR001736 GO:0003824
Rops11g01521 1119 PIRSF PLD_euk 42 620 IPR016555 GO:0004630|GO:0006654|GO:0048017
Rops11g01521 1119 PIRSF PLD_euk 610 1119 IPR016555 GO:0004630|GO:0006654|GO:0048017
Rops11g01521 1119 MobiDBLite consensus disorder prediction 134 158 - -
Rops11g01521 1119 SUPERFAMILY PH domain-like 254 346 - -
Rops11g01521 1119 Gene3D Endonuclease Chain A 738 976 - -
Rops11g01521 1119 Gene3D Endonuclease Chain A 370 607 - -
Rops11g01521 1119 Coils Coil 103 123 - -
Rops11g01521 1119 CDD PLDc_vPLD1_2_yPLD_like_1 376 520 - -
Rops11g01521 1119 SUPERFAMILY Phospholipase D/nuclease 334 603 - -
Rops11g01521 1119 MobiDBLite consensus disorder prediction 1 36 - -
Rops11g01521 1119 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 916 943 IPR001736 GO:0003824
Rops11g01521 1119 SMART PH_update 222 350 IPR001849 -
Rops11g01521 1119 Pfam PLD-like domain 789 965 IPR025202 -
Rops11g01521 1119 CDD PLDc_vPLD1_2_yPLD_like_2 776 960 - -
Rops11g01521 1119 PANTHER PHOSPHOLIPASE D 175 1109 IPR015679 -
Rops11g01521 1119 SUPERFAMILY Phospholipase D/nuclease 760 966 - -
Rops11g01521 1119 MobiDBLite consensus disorder prediction 635 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01521 Rops-Chr11 22837467 22859397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01521 1 996 Phospholipase D Gene Family (Wang group) AT3G16785 73.427 0.0 1402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01521 K01115 - gmx:100780514 2063.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01521 11 22837467 22859397 Rops11g01521 11 22837467 22859397 ECH