Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01520 ATGGTTCTTTTTCCATCCCTTGTCAATGGATTGGCAAGAACTGTGTCGTTTAAGAAAGAGAAGACTTGTGGAAAGGATGATGGAAGGAAAGCTGTGGAAGCATTAGCAAAGGAAGCAAGGAAGAATGAACTGTTACTGAGTTCATCTGGAATTGTTAAGTCTTCCAAGGCCAACAATTTTGCCTCTATGTTCACTAAGAAGGGCCAGAAAGGAGTCAATCAGGATCGCCTTATTGTTTGGGAGGAATTTGGTTGCCAAGAAGACATAATCTTCTGTGGAATTTTTGATGGACATGGCCCCTGGGGACACTATGTAGCCAAAAGGGTCAGGAAACTACTACCTGCTTCTTTGCTATGCAATTGGCAGGAAAATCTGGCTGCAACATCTCTTGACCTGGATTTTAAGATGGAAGCAGACAGGAACCTCCATAGATTTGACATATGGAAGCAGTCCTACATAAAGACTTGTGCTGCAATTGATCAGGATCTAAAGCAACATACTGGGATTAATTCCTTTCAAAGCGGTACTACAGCTTTGACAATTATCAAACAGGGTGACAATCTCTTTATAGCAAACGTTGGTGATTCTAGGGCTGTCTTGGCATCCACTTCAGAGGATGGCACATTGACTACTCTTCAGCTTACCACTGATTTCAAGCCAAACTTACCAAAGGAGGCAGAGCGCATAACACAATCAAGAGGGCAGGTCTTTTGTTTGGAAGATGAACCAGGAGTGTACAGGGTCTGGATGCCAAATGGTAAGACCCCAGGACTGGCAATATCAAGAGCATTTGGTGACTACTGTGTAAAAGATTTTGGACTAATCTCTGTGCCAGATGTGACACAAAGAAAATTGACCACCAGGGATCAATTTATAATCTTAGCCACGGATGGGGTATGGGATGTTATTTCCAACCAAGAAGCAGTGAAAATTGTAGCTTCAACGCCTCAGAGAGAAAAAGCAGCTCAAAGGCTCGTGAAATGCGCCATACATGAATGGAAACGCAAGAGAAGAGGCATTGCTATTGATGATATATCAGCTATTTGCCTCTTCTTTCACTCTCCCCCCTCTCATCAACTCCCTACTACCATCAAAGTTGTTGAATAA 1107 0.4282 MVLFPSLVNGLARTVSFKKEKTCGKDDGRKAVEALAKEARKNELLLSSSGIVKSSKANNFASMFTKKGQKGVNQDRLIVWEEFGCQEDIIFCGIFDGHGPWGHYVAKRVRKLLPASLLCNWQENLAATSLDLDFKMEADRNLHRFDIWKQSYIKTCAAIDQDLKQHTGINSFQSGTTALTIIKQGDNLFIANVGDSRAVLASTSEDGTLTTLQLTTDFKPNLPKEAERITQSRGQVFCLEDEPGVYRVWMPNGKTPGLAISRAFGDYCVKDFGLISVPDVTQRKLTTRDQFIILATDGVWDVISNQEAVKIVASTPQREKAAQRLVKCAIHEWKRKRRGIAIDDISAICLFFHSPPSHQLPTTIKVVE* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01520 368 PANTHER PROTEIN PHOSPHATASE 49 350 IPR015655 GO:0004722|GO:0006470
Rops11g01520 368 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Rops11g01520 368 Gene3D - 47 354 IPR036457 -
Rops11g01520 368 FunFam Probable protein phosphatase 2C 34 51 354 - -
Rops11g01520 368 SMART PP2C_4 51 350 IPR001932 -
Rops11g01520 368 CDD PP2Cc 59 352 IPR001932 -
Rops11g01520 368 Pfam Protein phosphatase 2C 84 331 IPR001932 -
Rops11g01520 368 SUPERFAMILY PP2C-like 55 355 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01520 Rops-Chr11 22832604 22834477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01520 1 353 PP2C-type Phosphatase Gene Family AT3G05640 61.690 3.85e-171 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01520 - - gmx:100814087 639.802