Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01497 ATGAGAAGCTTTACTCCTCTAAGAGATGAAAGGTTTAAACATATGCAAACCAATCCAGCTGTTATTACTGAGGACAGAATGTCAGAAGGAACCAGCCTGGTGCTGGAATCTTCTGAAAATGGCACGGATTTGTCCCAGGATGACATTGGCACCGTTGAAGAAACACCAGAGGAAACAATTTTGTCAAGACAAACTTCTGTCAACCTTGTTCCTTTTATTGGTCAAAGATTTGTCTCTCAAGAAGCCGCTTATGAATTTTATTGCAGTTTTGCTAAACAATGTGGCTTTTCTATTAGACGACATCGCACACGAGGGAAAGATGGGGTTGGTCGGGGAGTTACAAGGAGGGATTTTACTTGCCATCGTGGTGGATATCCCCAGAATAAACCTTCTGATGATGGGAAGGTGCAAAGGAACCGCAAATCGTCTCGCTGTGGTTGCCAAGCATATATGCGTATTGTGAAAAGGGCAGATTTTGATGTCCCTGAATGGCGTGTTACTGGTTTTAGGAACATCCACAATCATGAGTTGTTAAAATCCAATGAGGTCCATCTTCTTCCAGCATATTGTCCAATATCTCCTGATGACAAGAGTCGTATATGCATGTTTGCTAAAGCTGGAATGTCAGTAAGGCAAATGTTAAGATTGATGGAGCTAGAGAAAGGTGTCAAACTTGGTTGTCTTCCTTTTACCGAGATAGATGTGAGAAACTTGTTGCAGTCTTTCAGAAATGTCGATAGAGATAATGATGCTATTGATTTGATTGCTATGTGCAAGAGATTAAAAGATGAAAATCACAATTTCAAGTATGAATTCAAGATAGATAGTAATAACAGGCTTGAGCATATTGCATGGTCCTACGGCTCATCCATCCAATCATATGAGGCTTTTGGAGATGCTGTGGTTTTTGATACAACCTACCGAGTGGAGGCTTATGACATGCTGTTGGGAATTTGGCTTGGAGTGGACAATAATGGAATGATATGTTTCTTTAGTTGTGCACTTCTACGGGATGAAAATATGCAGTCTTTTTCATGGGCTTTAAAGGCTTTCCTGGATTTCATGAAAGGAAAGGCTCCGCAAACAATATTAACTGATCATAACACGTGGCTGAAAGAAGCTATTGCTGCTGAAATGCCTGAAACCAAACATGCCTTTTGTATATGGCATATTCTTTCTAAGTTCTCTGACTGGTTTTCTTTACTCCTTGGATCACAATATGATGAGTGGAAAGCTGAGTTTCATCGGCTCTACAATTTGGAGCTGGTGGAAGATTTTGAAGAAGGCTGGAGGCAAATGGTTGATAGATATGGACTCCACGCAAATAAACATATTATTAGCCTATATTCATTAAGGATATTTTGGGCTTTACCATTCTTGAGGCGTTACTTTTTTGCAGGATTGACCAGTACATGTCAGTCTGAGTTCATTAATGCTTTTATCCAACGGTTCTTGAGTGCACAATCTCAACCGGATCACTTTCTAGAGCAAGTAGCTGATATTGTTGATTTTAATGACCGGGCCGGAGCAAAGCAAAAGATGCAACGGAAACTTCAGAAAGGGTGCCTCAAAACAGGATCACCTATTGAGTCCCATGCTGCCACAGTACTTACTCCTTATGCCTCAAGTAAACTCCAGGATGAGCTAGTTTTGGCGCCACAATATGCATCCTTTCTGGTTGATGAAGGTTGTTTCCAGGTCAGACACCACTCTCAGACAGATGGAGGGTGCAAAGTATTTTGGGTTCAAGAGCACATCAGCTGCAGCTGCCATCTGTTTGAGTTTTCAGGCATCTTATGTAGACATGTTCTTCGTGTCATGTCAACTAACAACTGTTTTCACATTCCGGATCAATATTTACCTACCCGTTGGCGAAGCATCAATAATTTGTCTTCTGCTAACCATTTTCGGGGTACAACTAGCAGGGATCAGCCTGAAAAGATACAATTTTTGGAATCCATGGTTTCAACACTTTTAATGGAATCCATTGAAACTGAGGAACGCCTTGATGTTGCTTGTGAGCAAGTTTCCATGGTGCTTTCACGTATCAAAACCCTTCCCAGGTCATCACATGGCGTAAATGACATTGCATATAGTTATCCATCAGATTCATTGATCCTTCCAGAGGTAGAAGATACTGAAGGAATGATTCAAGGTTTTGCAATGGCAAATCCACATGATTCTATGGCTTTAGGCAAGCTAAAAGAGAGAAGGGCAAGAGATGGGGCTGATCTCACTAGGAAACGTAGACAGTTCTCAGCACCATTGTGTGCACAATATGGACATGATGCATCTGATTGCTCAATAATGGGGGGTGATAATATGAGTGGTGATGCATTAGGGTATATGTAG 2352 0.4124 MRSFTPLRDERFKHMQTNPAVITEDRMSEGTSLVLESSENGTDLSQDDIGTVEETPEETILSRQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGYPQNKPSDDGKVQRNRKSSRCGCQAYMRIVKRADFDVPEWRVTGFRNIHNHELLKSNEVHLLPAYCPISPDDKSRICMFAKAGMSVRQMLRLMELEKGVKLGCLPFTEIDVRNLLQSFRNVDRDNDAIDLIAMCKRLKDENHNFKYEFKIDSNNRLEHIAWSYGSSIQSYEAFGDAVVFDTTYRVEAYDMLLGIWLGVDNNGMICFFSCALLRDENMQSFSWALKAFLDFMKGKAPQTILTDHNTWLKEAIAAEMPETKHAFCIWHILSKFSDWFSLLLGSQYDEWKAEFHRLYNLELVEDFEEGWRQMVDRYGLHANKHIISLYSLRIFWALPFLRRYFFAGLTSTCQSEFINAFIQRFLSAQSQPDHFLEQVADIVDFNDRAGAKQKMQRKLQKGCLKTGSPIESHAATVLTPYASSKLQDELVLAPQYASFLVDEGCFQVRHHSQTDGGCKVFWVQEHISCSCHLFEFSGILCRHVLRVMSTNNCFHIPDQYLPTRWRSINNLSSANHFRGTTSRDQPEKIQFLESMVSTLLMESIETEERLDVACEQVSMVLSRIKTLPRSSHGVNDIAYSYPSDSLILPEVEDTEGMIQGFAMANPHDSMALGKLKERRARDGADLTRKRRQFSAPLCAQYGHDASDCSIMGGDNMSGDALGYM* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01497 783 MobiDBLite consensus disorder prediction 103 140 - -
Rops11g01497 783 MobiDBLite consensus disorder prediction 103 118 - -
Rops11g01497 783 Pfam FAR1 DNA-binding domain 85 178 IPR004330 -
Rops11g01497 783 SMART 26again6 586 613 IPR006564 GO:0008270
Rops11g01497 783 Pfam MULE transposase domain 301 393 IPR018289 -
Rops11g01497 783 Pfam SWIM zinc finger 584 608 IPR007527 GO:0008270
Rops11g01497 783 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 65 629 IPR031052 GO:0006355
Rops11g01497 783 ProSiteProfiles Zinc finger SWIM-type profile. 580 611 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01497 Rops-Chr11 22592219 22598910 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops11g01497 MULE 7.9e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01497 - - gmx:100778434 1444.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01497 11 22592219 22598910 Rops11g01497 11 22592219 22598910 ECH