Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01495 ATGGCAATGGATGTAGCAGATGCAATTAATGTAAGTTATGCTGCAAGTACTACTGTGGTTGAGATTCATTTACGAAATGCCATTGGAGAAGGTTTACTGAATTCTGGTTTGAAAATGGGAGTTGAAAAAGAAGGGACAAAAGGTGGAGGAGGATATGTTGGTGGTTTTTTCCACTTGTTTGATTGGACCTCAAAATCCCGTAAGAAATTATTTGCTTCTAAGTCAGATTTACCAGAGCCTTTGAAACAGGAAAGAAAAGTAAACTACAATGTGGCAATGAGACAGTCCTATCTGGTGGATGAAGATGAAAACGGTGTAGGGGCAAGTGTTAGAGGAAGCTGTGATCATAGTTATGCTTCATCTGTTACAGATGATGAAGCATGTGGAACAAGAGCCCCCAGTGTAGTTGCAAGGCTTATGGGATTAGATTCCTTGCCTCATTCCGGTTTTTCTGATCCATACTCTACCCCATATTTTGATACCCAATCACTTCAAGATGCTCAGTTCTTCAGGAAAAACCTCAGTCATCAGTATGACCATCAGACCCTATATTCTGGAAAGCTGGTTGAAAAGGTTGAGGGCTCTTCTAGGAACTTCATGGAGCCAAAGCCTCAAAAGACCATCACCAGGCCAATTGAAAAGTTCCAAACAGAAGTATTACCTCCAAAATCAGCTAAATCAATTCCTGTTACACACCATAAACTTTTGTCCCCTATTAAGTGTCCTGGCTTTATTCCAACCAACAATGCTGCTTATATAATGGAGGCTGCAGCAAGAATTATTGAACCTGGATCCCAAGCTAGTACAAAGGCTAAAACACCTCTGGTAGCATCATCACCAGTATCATTGAGGGTTAAAGATCTTAAAGATAAGTTGGAGTCTTCACAAAAAGGACCTCTAATTGGGTCATCTTCCATGACCTCTAGGGCTCGAGAACTAAAAGACAAAAGAGAAATTTCTCGTAGAACAACCAGGCTTTCAGAACCTTCTCAAAGGTCAGTCGAGTCAAATGCTGTGAAGTATTTAAAGGGACAATCTTTGAACAGAAGCTGGAATGGATCTGTGGATACATCCATCAAATCTCCTACACATGCAGAAGAAGATTCTTCTTTGAAGAATAAGGGGAAGTCTATTTCGCTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGTTTGAGTTTGACTGGTGGAAGAAGTTTGATGGGCCAAAAAGAGCATGTTGACATTAAATCCAACCAGCAAGCAAAGGCAAATGTTCAGAACAATTCGCAAAAGAAATCTTCTGGTGTTCTCAGGCAGAATAATCTGAAACAGAATAATTCAATTGATAAAGACAAGTTGCCATCAAAGCCATTGGTTTCCAATTCACAAGGTAGAAAAGTTCTTAATGGGGATTCCTCTTATGGGCGTCATAGAAGCTCTAGTAGTAAATCCATTGCAAAATCTAAAGTTGGATCCAGAAAGTCAGCCATGGAGGTGACAGATAGTGAAAAGGAAGTTTTGTATACCAGCACAAACAATTTTCCAAGAAAGAAAAGGTCTACAGACAAGGACTGGAATGACAGGGTTGTGGATAATTTGTTCATTGACAAAACTCAGAAGCCTGTTAAGTCTAATCAAGTAAGGAATAAACAATATGGTTGGGCTGAAGAAGTCAAAAAGAAAGACATGGATGTAGTTTCCTTCACATTTACCACACCATTAACCAGGAGCAATCCAGATTTTGAGACATCTGGACAAACCAGCAAGAATATCAATGGTCTTTCCTTGGATCAACGCATTAAAAGAGTGTTGCTTGACACAGACAATACAAGGTCTCCAATAGGATACAATGTAATTGGTGGTGATGCCTTAGGTATCCTTTTGGAACAGAAATTGAGGGAATTAACATGTGGTGTTGAAACCTCTGGCAATGACATTTCAAAAGTGAGGCAACCTTCCTTTACTGCATCAATGTCAGATGATCAAGTAACCAACCTTAATGTAGTTAACCTCAACCCAAGATTGCAACAGAAGAAAGACCAAGATATGTCATTTACAGACAAGTTAAGCAGTAGTCGTGGTTCTGACTTCTTCACCAATTTTCCTGAATCATCATTGAAACATAACTCATGGGTTGATGAGATGGAACCACAGTTACTCAATTGTCGACAGCCAAGTCCAATCTCTGTTCTTGAGCCTTGTTTTTCAATTGAAAGCTGTGAATCTTCGATGAGTGCAGATGTTACTAGTACAGAAGGAAGCAAGTTGCACTCATCTGTTCAAGCTCAGGAAGTTTATGGCTTTAATTTTTCAAGGAAGTTCTATCCTATTGAATCTGATACAGAGTTATCTGATTCAGCTTCTTCAACATCAACCACCATGGTGAAAAACCACACAAGTAAATTTTCTGTCATGAAGTTTGGAAGATCAAGTACATGGGAGTTGGACTATGTGAAAGATATATTGTGTAATGTTGAGTTAATGTATATGGATTTTTCCCTTGGTCGATCTCGTGAGATTGTAAACTCTCATCTATTTAACCAGTTGGAAAGTCGAAAGGGAGGTTTTCAGAGTGATGATGATTCCAGGATAAGAAGGAAAGTTATATTTGATTGTGTGAGTGAATGTTTGGACTTAAGATGCAGGCGTTATGTAGGGGGAGGATACAAAATGTGGACCAAAGGGGTTGCAATGATGAAAAGAAAGGAATGGTTGGCAGAAGATGTGTACAAGGAGATTTCAGGTTGGAGAGGGATGGGGGATTCAATGGTTGATGAGCTTGTGGACAAGGACATGAGCAGCCAGCATGGAAAATGGCTAGATTTTGAGGTTGATGCTTTTGAATTTGGAGCAGAGGTCATGGACCAAATATTCGATTCTTTGGTTGATGATGTTGTCAGTGAAATCTTGCAATTGTAA 2907 0.3953 MAMDVADAINVSYAASTTVVEIHLRNAIGEGLLNSGLKMGVEKEGTKGGGGYVGGFFHLFDWTSKSRKKLFASKSDLPEPLKQERKVNYNVAMRQSYLVDEDENGVGASVRGSCDHSYASSVTDDEACGTRAPSVVARLMGLDSLPHSGFSDPYSTPYFDTQSLQDAQFFRKNLSHQYDHQTLYSGKLVEKVEGSSRNFMEPKPQKTITRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKCPGFIPTNNAAYIMEAAARIIEPGSQASTKAKTPLVASSPVSLRVKDLKDKLESSQKGPLIGSSSMTSRARELKDKREISRRTTRLSEPSQRSVESNAVKYLKGQSLNRSWNGSVDTSIKSPTHAEEDSSLKNKGKSISLAIQAKVNVQRREGLSLTGGRSLMGQKEHVDIKSNQQAKANVQNNSQKKSSGVLRQNNLKQNNSIDKDKLPSKPLVSNSQGRKVLNGDSSYGRHRSSSSKSIAKSKVGSRKSAMEVTDSEKEVLYTSTNNFPRKKRSTDKDWNDRVVDNLFIDKTQKPVKSNQVRNKQYGWAEEVKKKDMDVVSFTFTTPLTRSNPDFETSGQTSKNINGLSLDQRIKRVLLDTDNTRSPIGYNVIGGDALGILLEQKLRELTCGVETSGNDISKVRQPSFTASMSDDQVTNLNVVNLNPRLQQKKDQDMSFTDKLSSSRGSDFFTNFPESSLKHNSWVDEMEPQLLNCRQPSPISVLEPCFSIESCESSMSADVTSTEGSKLHSSVQAQEVYGFNFSRKFYPIESDTELSDSASSTSTTMVKNHTSKFSVMKFGRSSTWELDYVKDILCNVELMYMDFSLGRSREIVNSHLFNQLESRKGGFQSDDDSRIRRKVIFDCVSECLDLRCRRYVGGGYKMWTKGVAMMKRKEWLAEDVYKEISGWRGMGDSMVDELVDKDMSSQHGKWLDFEVDAFEFGAEVMDQIFDSLVDDVVSEILQL* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01495 968 MobiDBLite consensus disorder prediction 410 498 - -
Rops11g01495 968 MobiDBLite consensus disorder prediction 452 485 - -
Rops11g01495 968 MobiDBLite consensus disorder prediction 289 338 - -
Rops11g01495 968 MobiDBLite consensus disorder prediction 350 373 - -
Rops11g01495 968 MobiDBLite consensus disorder prediction 309 325 - -
Rops11g01495 968 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 38 964 - -
Rops11g01495 968 Pfam DUF761-associated sequence motif 120 151 IPR032795 -
Rops11g01495 968 MobiDBLite consensus disorder prediction 414 444 - -
Rops11g01495 968 Pfam Domain of unknown function (DUF4378) 810 960 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01495 Rops-Chr11 22538004 22546786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01495 54 966 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 32.303 2.18e-95 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01495 - - gmx:102669513 1436.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01495 11 22538004 22546786 Rops11g01495 11 22538004 22546786 ECH