Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01470 ATGGAAGACTTCAGTGAGTTCAGTTTTGGTGTAGCTGAGGACAAATATAGTTCATCCAATGATATTTTCTGGGCTACCAAGGGATTGTATGAGGTGAATAAGGATCAATTTTCTGGAGCTGGAGATTGTAAAGAGTCTGAGGGAATTGAATCTCTTTGTTCTAGTTTTGGGTTCATTCCAAATGATCCAACAGAAGAAGGAGGATTTCTTCTGTCCACTAATCAACAAAAGTATCACCAACAACCATCATATAAAGATTATGAACCATTGGATAACCTACAGTTTGACATGGTCCAGTTAGATGAACAATATGAAACCATGGTTCCACTTTGTGACTCTACAAAGGAAAAGCAATACTCAACTCCTTTAACCCCAGTTGAGATCTTGAAGAACTATGGCAAGGGCTTCAAGAGGTTATGTGATGAAGGAGAAGTTTTACATCCAGTTGATGATTTGGGTAAAGTCACAAATGAAGGTGGGAGAAAGCTGTCAACTGAAGAAGTCATGAGGGTAGCTGCAACAAGGTTCATCCAATCATCTTCAGAATCAAAAGGTAAGCAATTCTTGGTTAATAACCCTTTTGGTTTTTCTTTCTCTGGACTCTCTGATGAAGAGAAAGAGGATGTTGCACTTGCTGAATCACTCTTGGCTTGTGCTGAGAAAGTTGGCTATCAACAGTTTGAACGTGCTAGCAAATTGCTGAGTCATTGTGAATCACTGTCTTGCAAGACTGGGAACCCCGTTAAGCGTGTTGTTCATAATTTTGCTGAAGCACTTCGTCAGAGGATAGATAGAGAAACAGGAAGAGTTTCATCTAAAGATTTGCAAAAGATGCAGTCATTTGATCCTGAAGAGGTAACCAAGGATCTAAACCCAACCCTTTATGCATTTTATGAAGCGCTTCCTTTCTGTCAGGTTTCAATGTTCACAGCAGTACAAGGTGTAATAGAAAATGTAACTGAGGCAAAGAAGATTCATGTTATTGATCTTGAAATCAGAAAGGGGATACAGTGGACAATCCTGATGCATGCACTTGAGTCAAGAAGACATGAATGTCCACTTGAGCTTCTAAAGATAACAGCTGTTGGGTGTGGAACCACTTCAAAGCATATATTTGAGGACACTGGCAAGAGATTGAAGGATTTTGCACAGAGCTTGAACATACCCTTCTCCTTCAATATAGTCATGGTATCAGATATTTTACATCTCAAAGAAGACCTTTTTGAAATAGATCCTGAGGAAACAGTTGTAGTTTACTCTCAGTTTGCACTTAGAAGCAAGATTCAACAATCAGACCAACTTGAAACTATCATGAGAGTGATTAGAACCATAAATCCTGTTGTAATGGTGGTAGCTGAAACTGAGGCAAACCACAATTCTACATCTTTTGCAACCCGTTTCATTGAAACTCTTTTCTACTTCAGTGCATTCTTTGATTGTCTTGAGGCTTGTATGAAAAGGGATGACCAGAACCGAATGATTATAGAATCACTATACTTCAGTCATGGAATCAAGAATATTGTGGCTGAAGAAGGAGCAGAAAGAAAGACTAGAAATGTAAAGATTGATGTGTGGAGGGCTTTTTTCTCTCGTTTTGGAATGGTGGAGACAGAACTGAGCCTGTCATCTTTATTCCAAGCGGATTTAGTGACTAAGAGATTTCCTTGTGGAAGTTCTTGCACATTTGATATGAATGGGCAGTGCCTTCTTATTGGGTGGAAGGGAACACCAATCAACTCTGTTTCTGTTTGGAAATTCCTTTGA 1764 0.3917 MEDFSEFSFGVAEDKYSSSNDIFWATKGLYEVNKDQFSGAGDCKESEGIESLCSSFGFIPNDPTEEGGFLLSTNQQKYHQQPSYKDYEPLDNLQFDMVQLDEQYETMVPLCDSTKEKQYSTPLTPVEILKNYGKGFKRLCDEGEVLHPVDDLGKVTNEGGRKLSTEEVMRVAATRFIQSSSESKGKQFLVNNPFGFSFSGLSDEEKEDVALAESLLACAEKVGYQQFERASKLLSHCESLSCKTGNPVKRVVHNFAEALRQRIDRETGRVSSKDLQKMQSFDPEEVTKDLNPTLYAFYEALPFCQVSMFTAVQGVIENVTEAKKIHVIDLEIRKGIQWTILMHALESRRHECPLELLKITAVGCGTTSKHIFEDTGKRLKDFAQSLNIPFSFNIVMVSDILHLKEDLFEIDPEETVVVYSQFALRSKIQQSDQLETIMRVIRTINPVVMVVAETEANHNSTSFATRFIETLFYFSAFFDCLEACMKRDDQNRMIIESLYFSHGIKNIVAEEGAERKTRNVKIDVWRAFFSRFGMVETELSLSSLFQADLVTKRFPCGSSCTFDMNGQCLLIGWKGTPINSVSVWKFL* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01470 587 Coils Coil 587 587 - -
Rops11g01470 587 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 182 575 IPR005202 -
Rops11g01470 587 ProSiteProfiles GRAS family profile. 202 585 IPR005202 -
Rops11g01470 587 Pfam GRAS domain family 212 585 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01470 Rops-Chr11 22079280 22081043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01470 201 586 GRAS Transcription Factor Family AT3G03450 31.959 3.11e-60 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops11g01470 GRAS 6e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01470 - - gmx:100818523 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01470 11 22079280 22081043 Rops11g01470 11 22079280 22081043 ECH