Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01469 ATGGACAACCAGCAGAGGCTGATAGTAAGAAAGGTATGTGAAATCTATGGTAAAATCTCTAGGTTAGGAAACCTCAATCCCTCTAACCATGTCAATGACCTCTTTACCCAACTTGTAACAACTTGCACCACCCCATGTCAAATAGATGTTACTCAGCTTCCCCAAGAGGTTAAAGAAACCATAGCTAAGCTAATTAGACTTTGTGGGAAAGCTGAGGGACTTCTTGAAAGTCATTACTCTTCTCTCATAGGATCTCATGAGAATCCATTAAACCACATCAAACTCTTCCCTTATTACTCCAACTACCTCAAACTTAGCCATTTGGAATTCACCATGCTCACCACACACTGCACTCAAGTTCCAACCCAACTTGCCTTTATTGGCTCTGGTCCCCTTCCTCTTACCTCAATCATGTTGGCCACCTATTACTTGAAACACACATGTTTTCACAACTATGATATGGATCCATCAGCAAATGCCAAGGCTTATGACTTGATCTCATCAGACCCTGACTTGTCAAAAAGAATGTTCTTCCACACTAGTGATATAACAAATGTGTCAAATGGACTTGAGGAGTATAATGTTGTCTTCTTGGCTGCACTTGTAGGCATGGACCAAAAGGAGAAAACAAAAGTGATCAATCACTTAGCTAAACACATGGCTCCTGGGGCCATTTTGGTTCTAAGGAGTGCACATGGAGCTAGAGCTTTCCTCTATCCAATTGTTGATCCTTCTGATCTCAAAGGTTTTGAAGTTCTATCAGTTTTTCACCCAACTGATGAGGTTATAAATTCAGTAATTGTTGCAAGGAAACATTCAGTGAATCAAGGGCTTTACTCACCAGTATTGTCTAGCAAATGTCATGAAGTTGAAGGTTTTAATCCCTTGAACCATGGGAATGTTATTGATGAGTTGACCATTGATGACCATGCTTGA 936 0.4049 MDNQQRLIVRKVCEIYGKISRLGNLNPSNHVNDLFTQLVTTCTTPCQIDVTQLPQEVKETIAKLIRLCGKAEGLLESHYSSLIGSHENPLNHIKLFPYYSNYLKLSHLEFTMLTTHCTQVPTQLAFIGSGPLPLTSIMLATYYLKHTCFHNYDMDPSANAKAYDLISSDPDLSKRMFFHTSDITNVSNGLEEYNVVFLAALVGMDQKEKTKVINHLAKHMAPGAILVLRSAHGARAFLYPIVDPSDLKGFEVLSVFHPTDEVINSVIVARKHSVNQGLYSPVLSSKCHEVEGFNPLNHGNVIDELTIDDHA* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01469 311 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 232 IPR029063 -
Rops11g01469 311 PANTHER NICOTIANAMINE SYNTHASE 3 4 278 IPR004298 GO:0030410|GO:0030418
Rops11g01469 311 Gene3D Vaccinia Virus protein VP39 7 273 IPR029063 -
Rops11g01469 311 Pfam Nicotianamine synthase protein 2 274 IPR004298 GO:0030410|GO:0030418
Rops11g01469 311 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01469 Rops-Chr11 22045311 22046246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01469 1 306 Nicotianamine Synthase Gene Family AT5G04950 52.978 4.62e-121 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01469 K05953 - gmx:100814069 513.457