Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01452 ATGGGAACCCCAGAAGAAGAAGCAGAAGAAGAGCTTCTCAAGAAGATTGAACAGCTAGAAGCTGGTCACGCTCACCTCAAGCAAGAAATGTCAAAGTTCAAGCTTTCACAGCGCCGAAGGTCTCACTCTGTGTCACCACAACGTTCCAGGTTAAGCGGTGCTTCATTTAATAATGGCCCTTCTTCACCTTTGCAGAGAGATAGTCGCAGTTATGATCAAAATGGTGGCAAGTATCTCAATATTTTGCAGTCAATGGGTCATTCCCTTCATATATTGGATCTTCAGTGTAATATTATATACTGGAACCCTAGTGCTGAAAATCTGTATGGTTATGCTGCAGAAGAAGTTCTTGGCCATGATGGGATTGAGTTGCTTGTAGACCCCAGGGAATTTGCTTTAGCTCATGATATATTCAATCATGTCAAAATGGGAGAGAGTTGGAGTGGCTTATTCCCTATGAAGAATAAGATGGGGGATAGGTTTATATCTGTGGCAACCAATACACCTTTCTATGATGATGATGGAAGATTGGTTGGGGTTATTTGTGTCTCCAGTGATTCACAGCCCTTTCTTGAAACCAGAGTTCCCTTTTCAGATGGAAAGATTGCAAAACCAGATTCAGGTTCCAATTGTCCTAGAAGTGATGGCATTACTCTCGCATCGAAAATTTCAAATTTGGCCTCGAAGGTGAGTAACAAAGTTAAGTCTAGAATCCAGACCCGAGAAAATAATGTTGATGGAGGATGTGTGAGCATAGGAAGTCATCATTCTGAGCATGGTTTCTCAGACTGTGTTCTTTCTGACCAGAGAGAAGATGGTAATTCCAGTGGAGCTAGCACGCCCAGGGGAGGGGTGCCACTGACTCCTTTCAGTGTATTTTCTCATGTTGAAGAGAAATCCCAAGAAAAAACTACGAGGGAGTCTGAAGATGAGAGTGAAGGAAAACCTATTCACAAGATCATAACTTCTAAGGCGGAAGCATGGATTCAAAAGAAAACATTATCATGGCCATGGAGAGCAAATGATAGGGAAGGATCCGAGGCAACGAATGTTCGTGTTGCTTGGCCTTGGTTGCAGGGTGATCAAGAAAAAGAGCCAGTTAATCAGAAGAATCATTCTTCTGGGTTGAAGCAAGAAAGCCAGGCAGGCGAAAGTGATCGACCTGTTAATAATGAGGCTTCAGGATACTGGTCCTCCTTCAATATTAAGAGCACAAGTAGTATCAGCAGCTATGGGAGTAGCAGCAGTTCTGCTGCCAATAATAAAGTGGATATTGACACTGATTGCTTGGATTATGAAATTTTGTGGGAGGACTTGACAATTGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTATATCATGCTCTGTGGTATGGATCAGATGTTGCTGTCAAGGTTTTCTCAAAGCAGGAATACTCAGATGATGTGATACTTTCCTTCAGACAAGAGGTGTCTCTCATGAAAAGACTTCGCCATCCAAATATTCTTCTCTTTATGGGGGCAGTGACTTCACCTCAACGTCTATGCATTGTAACAGAGTTTCTACCACGCGGAAGCTTGTTTTGTTTGCTCCAGAGAAACACATTCAAACTTGACTGGAGACGACGAGTTCATATGGCCTTAGATATTGCTCGAGGTGTAAATTATCTTCATCATTACAACCCCCCGATCATCCATCGAGATTTAAAGTCTTCAAATCTTCTAGTTGATAAGAATTGGACTGTGAAGGTCGGTGATTTTGGTCTTTCACGTCTTAAACATGAAACATATCTCACAACTAAGACAGGGAAGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAGTGAACCTGCAGATGAGAAGTCTGACGTTTACAGCTTTGGGGTGATTATGTGGGAACTTACGACTGAAAAGATCCCTTGGGATACTCTCAATGCAATGCAGGTTATTGGAGCTGTAGGGTTTATGAACCATCGGCTAGAAATTCCACAAGATGTTGATCCACAGTGGGCTTCTATAATTGAGAGCTGCTGGCATAGTGATCCAGCTTGCCGACCAACATTCCAAGAACTTCTAGAAAGGCTTAGAGAACTGCAGAGACGATATGCCATTCAGTTCCAGGCAGCTAGATCAGCTGGTGGAGAAGGCACTCAAAAGGAGTCCTAG 2154 0.4308 MGTPEEEAEEELLKKIEQLEAGHAHLKQEMSKFKLSQRRRSHSVSPQRSRLSGASFNNGPSSPLQRDSRSYDQNGGKYLNILQSMGHSLHILDLQCNIIYWNPSAENLYGYAAEEVLGHDGIELLVDPREFALAHDIFNHVKMGESWSGLFPMKNKMGDRFISVATNTPFYDDDGRLVGVICVSSDSQPFLETRVPFSDGKIAKPDSGSNCPRSDGITLASKISNLASKVSNKVKSRIQTRENNVDGGCVSIGSHHSEHGFSDCVLSDQREDGNSSGASTPRGGVPLTPFSVFSHVEEKSQEKTTRESEDESEGKPIHKIITSKAEAWIQKKTLSWPWRANDREGSEATNVRVAWPWLQGDQEKEPVNQKNHSSGLKQESQAGESDRPVNNEASGYWSSFNIKSTSSISSYGSSSSSAANNKVDIDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFRQEVSLMKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLFCLLQRNTFKLDWRRRVHMALDIARGVNYLHHYNPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRSEPADEKSDVYSFGVIMWELTTEKIPWDTLNAMQVIGAVGFMNHRLEIPQDVDPQWASIIESCWHSDPACRPTFQELLERLRELQRRYAIQFQAARSAGGEGTQKES* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01452 717 MobiDBLite consensus disorder prediction 46 70 - -
Rops11g01452 717 CDD PAS 91 186 IPR000014 -
Rops11g01452 717 ProSiteProfiles Protein kinase domain profile. 439 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01452 717 Gene3D Transferase(Phosphotransferase) domain 1 517 716 - -
Rops11g01452 717 CDD STKc_MAP3K-like 445 691 - -
Rops11g01452 717 Coils Coil 9 29 - -
Rops11g01452 717 SMART pas_2 76 142 IPR000014 -
Rops11g01452 717 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 207 697 - -
Rops11g01452 717 SUPERFAMILY PYP-like sensor domain (PAS domain) 80 183 IPR035965 -
Rops11g01452 717 PRINTS Tyrosine kinase catalytic domain signature 552 570 IPR001245 GO:0004672|GO:0006468
Rops11g01452 717 PRINTS Tyrosine kinase catalytic domain signature 618 640 IPR001245 GO:0004672|GO:0006468
Rops11g01452 717 PRINTS Tyrosine kinase catalytic domain signature 662 684 IPR001245 GO:0004672|GO:0006468
Rops11g01452 717 PRINTS Tyrosine kinase catalytic domain signature 513 526 IPR001245 GO:0004672|GO:0006468
Rops11g01452 717 PRINTS Tyrosine kinase catalytic domain signature 599 609 IPR001245 GO:0004672|GO:0006468
Rops11g01452 717 Pfam PAS domain 91 186 IPR000014 -
Rops11g01452 717 ProSiteProfiles PAS repeat profile. 74 145 IPR000014 -
Rops11g01452 717 MobiDBLite consensus disorder prediction 265 319 - -
Rops11g01452 717 MobiDBLite consensus disorder prediction 268 282 - -
Rops11g01452 717 MobiDBLite consensus disorder prediction 371 390 - -
Rops11g01452 717 Pfam Protein tyrosine and serine/threonine kinase 439 691 IPR001245 GO:0004672|GO:0006468
Rops11g01452 717 SUPERFAMILY Protein kinase-like (PK-like) 421 691 IPR011009 -
Rops11g01452 717 Gene3D PAS domain 87 189 - -
Rops11g01452 717 MobiDBLite consensus disorder prediction 27 70 - -
Rops11g01452 717 FunFam PAS domain-containing protein tyrosine kinase 432 516 - -
Rops11g01452 717 MobiDBLite consensus disorder prediction 356 390 - -
Rops11g01452 717 Gene3D Phosphorylase Kinase; domain 1 432 516 - -
Rops11g01452 717 MobiDBLite consensus disorder prediction 296 319 - -
Rops11g01452 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 558 570 IPR008271 GO:0004672|GO:0006468
Rops11g01452 717 SMART serkin_6 439 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01452 717 FunFam PAS domain-containing protein tyrosine kinase family protein 517 708 - -
Rops11g01452 717 NCBIfam PAS domain S-box protein 78 186 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01452 Rops-Chr11 21722075 21727761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01452 5 708 MAP Kinase Kinase Kinase AT3G06620 57.050 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Rops11g01452 PK_Tyr_Ser-Thr 4.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01452 - - gmx:100815858 1077.39