Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01449 ATGGCTTCTTCGTCGTGGTCATCTTTGCATGCTTCAACAAAATTCATAGTGGCAATTATCTTGTTTTGCATGTCATATTGTGCTTTTGGTTATGATACACAAACGATCATAGATTCTCCTTTGTTAACACAAAAGTTAGGAATTAACCGCACTATCAAAGTAGATATCAATGGAAATGGGGACTTCAAATCTGTCCAAGCTGCCATTGATTCCATTCCTGAAGGAAATTCTAATTGGGTGATCGTCCACGTTAGGAAAGGAGTGTACAGAGAAAAGGTGCATATACCAAAGACAAAGAGTTATATATTCATGAGAGGGAATGGTAGAGGAAAAACTGCCATAGTTTGGTCTCAAAGCTCTTCTGACAACATAGCTTCTGCCACCTTCAAAGCTGAAGCCCCTGATTTCATTGCTTTTGGAATTAGCTTCAAGAATGAGGCACCTACAGGGGTTGCCTATACCTCACAGAATCAATCGGTGGCAGCATTTGTGGCAGCAGACAAAGTGGCATTTTACCATTGTGCATTTTACAGTACTCACAACACTCTCTTTGATTACAAAGGCAGACATTACTACGAGTCCTGCTACATTCAAGGCTCCATTGATTTCATATTTGGCCGTGGTAGATCGGTCTTCCATAGCTGTGAGATGTTTGTGGTTGATGAGAAAAGGGTTAAAATTCATGGGTCAATCACAGCTCACAACAGGCAAAGTGAACCTGAGATTAGTGGGTTTATCTTTGTGAAAGGCAAGGTTTATGGCATTGGTGGTGTGTACCTAGGAAGAGCCAAGGGTGCTTATTCTAGGGTCATTTTTGCACAAACATATCTCTCCAAGACCATTGTCCCGGAAGGGTGGACCAATTGGAGCTATGATGGTAGCACAGAAAATCTATTCCATGCCGAGTACAAATGCCATGGACCTGGAGCCGCTACAGAGGGACGTGCTTCTTGGTCAAAGCAGCTTACTGATGAAGAAGCTGCTCCCTATTTGTCTATTGATTTCATTGATGGCAAGAATTGGTTACCAGTATGGCAATAA 1041 0.4207 MASSSWSSLHASTKFIVAIILFCMSYCAFGYDTQTIIDSPLLTQKLGINRTIKVDINGNGDFKSVQAAIDSIPEGNSNWVIVHVRKGVYREKVHIPKTKSYIFMRGNGRGKTAIVWSQSSSDNIASATFKAEAPDFIAFGISFKNEAPTGVAYTSQNQSVAAFVAADKVAFYHCAFYSTHNTLFDYKGRHYYESCYIQGSIDFIFGRGRSVFHSCEMFVVDEKRVKIHGSITAHNRQSEPEISGFIFVKGKVYGIGGVYLGRAKGAYSRVIFAQTYLSKTIVPEGWTNWSYDGSTENLFHAEYKCHGPGAATEGRASWSKQLTDEEAAPYLSIDFIDGKNWLPVWQ* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01449 346 ProSitePatterns Pectinesterase signature 2. 197 206 IPR033131 -
Rops11g01449 346 Gene3D - 46 345 IPR012334 -
Rops11g01449 346 SUPERFAMILY Pectin lyase-like 48 344 IPR011050 -
Rops11g01449 346 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 48 342 - -
Rops11g01449 346 Pfam Pectinesterase 53 338 IPR000070 GO:0030599|GO:0042545
Rops11g01449 346 FunFam Pectinesterase 47 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01449 Rops-Chr11 21685582 21687610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01449 49 342 Carbohydrate Esterase AT5G47500 39.803 1.08e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01449 - - gmx:100792967 586.26