Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01445 ATGCTTCAGCCATTGATGAATCTTCTCTCTCCCTGTTGGAAACCGTTCGTCAATGGTGACGACTCTTCACCAGGCATTGTCGGAAAAGACGGCTTGCTTTGGTTCCGAGACATCGGAAAATATGGCTCCGGCGACTTCTCCATGGCAGTCGTTCAAGCCAATCAGGTCCTCGAAGACCAGAGCCAGATCGAGTCCGGTCCTCTCGGAACCTTCGTCGGCGTTTACGACGGTCACGGTGGACCCGATGCTTCGCGATACGTTTGTGATCACTTGTTCCGTAATTTCCAAGCAATATCTGGTGAGTCACGGGGTGTTGTGACAGCTGAGACTATTCAAACGGCATTTCGCCAAACAGAAGAGGGGTTCACTGCCCTTGTTTCAGAATTGTGGAATACTCGACCTCAAGTTGCAACTACTGGAACCTGTTGTCTTGTTGGGGTGATTTTTCAGCAGACACTCTTTGTGGCAAATCTTGGAGATTCCCGTGTTGTGTTGGGCAAGAAAGTTGGAAACACCGGTGGGATTGCTGCGATTCAACTGTCTACAGAACACAATGCAAATATTGAGTCTATTAGACATGAACTTAAAGAATTACACCCTAATGATCCCCAAATTGTTGTACTCAAACATGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCTAGATCCATAGGTGATGTGTATATGAAACATGCGCAGTTTAACCGGGAACCAATTCAACCAAAATTCAGACTTCCTGAACCAATGAACATGCCTATCTTGTCTGCTAATCCAACTATTATTTCTCATCCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCAGCTGAGTAATGAAAAAGCAGTTGATATTGTTCACAGCAATCCACGTGCGGGTAGTGCAAAGAGACTGGTGAAGGCTGCCCTGCACGAAGCTGCAAGGAAACGTGAGATGCGATATTCAGACCTTCGGAAGATAGACAAGAAGGTTCGACGGCATTTTCATGACGATATAACTGTTATTGTTTTATTCTTAAACCACGACCTTATTTCTAGAGGTACCATTCTAAACCCCCCACTCTCAATTCGAAGTGCCCTCGATCACTGA 1110 0.4532 MLQPLMNLLSPCWKPFVNGDDSSPGIVGKDGLLWFRDIGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGVYDGHGGPDASRYVCDHLFRNFQAISGESRGVVTAETIQTAFRQTEEGFTALVSELWNTRPQVATTGTCCLVGVIFQQTLFVANLGDSRVVLGKKVGNTGGIAAIQLSTEHNANIESIRHELKELHPNDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFNREPIQPKFRLPEPMNMPILSANPTIISHPLQPNDSFLIFASDGLWEQLSNEKAVDIVHSNPRAGSAKRLVKAALHEAARKREMRYSDLRKIDKKVRRHFHDDITVIVLFLNHDLISRGTILNPPLSIRSALDH* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01445 369 Pfam Protein phosphatase 2C 69 317 IPR001932 -
Rops11g01445 369 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Rops11g01445 369 PANTHER PROTEIN PHOSPHATASE 43 344 IPR015655 GO:0004722|GO:0006470
Rops11g01445 369 Gene3D - 38 354 IPR036457 -
Rops11g01445 369 ProSiteProfiles PPM-type phosphatase domain profile. 45 346 IPR001932 -
Rops11g01445 369 CDD PP2Cc 46 346 IPR001932 -
Rops11g01445 369 SMART PP2C_4 32 344 IPR001932 -
Rops11g01445 369 SUPERFAMILY PP2C-like 55 347 IPR036457 -
Rops11g01445 369 FunFam Probable protein phosphatase 2C 42 36 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01445 Rops-Chr11 21553568 21559096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01445 1 366 PP2C-type Phosphatase Gene Family AT4G38520 58.886 1.01e-158 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01445 K01102 - gmx:100790813 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01445 11 21553568 21559096 Rops11g01445 11 21553568 21559096 ECH
Rops2g04975 2 89486542 89490852 Rops11g01445 11 21553568 21559096 PCT