Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01380 ATGATGATAGAGATGGGTTCCATGTGGGTGGTCTTTGGTGCCATTGCTGGTGCTCTTTTGGTCCTAAGATACCTTCTCAAGAATGTGAATTGGTTTCTCTATGAATACAAACTGGGTGAGAAGCAGTACTCCTTGCCACCAGGTGACATGGGCTGGCCCTTGGTTGGCAACATGTGGTCCTTTCTTAAAGCTTTCAAGACAGCTGATCCTGATTCCTTCATGGCCTCCTTTGTCTCCAGGTTTGGAAAAACTGGTATATATAAGGTCTTGATGTTTGGAAACCCAAGTGTAATTGTGACAACACCTGAAGCATGTAGAAGAGTTCTAACAGATGATGATAAATTCACTCTTGGTTGGCCTCGCTCCACAATAGAGCTCATTGGAGAGAAGTCATTCATTGCAATGTCTTATGAAGAACATAGACGCCTTAGGCGTTTGACATCTGCTTCAATCAATGGCTACGAAGCACTGTCTGTGTACTTGCAATACATTGAAGAAATTGTGAAAAGTTCATTGGAGAAATGGACCAAAATGGGAGATATTGAGTTTTTGCCTCAGATGAGGAAGCTTACTTTCAAAATCATTGTGCATATTTTCCTTGGAGCAGAAAGTGATCCTGTTATGGAGGCTTTGGAAAGAGAATACACAGCACTTAATCTTGGAGTTAGAGCTATGAGAATTAATCTTCCTGGATTTGCATTCCATAAAGCATTCAAGGCAAGGAAAAATCTACTGGCTATATTTCAGTCTATTGTGGATAAGCGAAGACAAGAAAGGAAGGAAAATTTACCAAGCAAAAAGGCCAAAGATATGATGGATGCTCTGATAGATGTTGAAGATGAAAATGGAAGAAAATTGGGTGATGATGACATCATTGATATCATGTTGATGTACTTGAATGCTGGTCATGAATCTTCAGGACATATTACCATGTGGGCTACCTATTTGCTGCAAAAGCATCCAGAATATCTCAAAAAGGCCAGGGAGGAACAAGAAGAAATAATAAGGAAAAGGCCTCCAACACAGAAAGGGTTGAAACTCGAGGAAGTTAGGAAGATGGAATTTCTTTCTAAGGTGATCGATGAGACAATGCGTGTGATTACATTCTCACTAGTGGTCTTTCGGGAGGCAAAATCTGATGTCAATATTAATGGTTACACCATTCCAAAAGGTTGGAAAGTTCTGGTCTGGTTCAGGTCGGTTCATCTTGATCCTGAAATATATCCTAATCCAAAGGAGTTCAATCCTTATAGATGGAATGAGGTGCACAAGGCTGGAGAATTCCTTCCATTTGGAGCAGGAACTAGATTGTGTCCTGGAAATGATCTTGCCAAGCTGGAAATCTCAGTTTTCCTTCATCATTTTCTGCTGAATTACGAGCTTGAACAGCTTAATCCAAAATCTCCTATAAGATTCTTACCTCATACAAGGCCTATGGACAATTGCTTGGCAAGGATCAAGAAGCGTTTGTCTGCATGA 1479 0.4057 MMIEMGSMWVVFGAIAGALLVLRYLLKNVNWFLYEYKLGEKQYSLPPGDMGWPLVGNMWSFLKAFKTADPDSFMASFVSRFGKTGIYKVLMFGNPSVIVTTPEACRRVLTDDDKFTLGWPRSTIELIGEKSFIAMSYEEHRRLRRLTSASINGYEALSVYLQYIEEIVKSSLEKWTKMGDIEFLPQMRKLTFKIIVHIFLGAESDPVMEALEREYTALNLGVRAMRINLPGFAFHKAFKARKNLLAIFQSIVDKRRQERKENLPSKKAKDMMDALIDVEDENGRKLGDDDIIDIMLMYLNAGHESSGHITMWATYLLQKHPEYLKKAREEQEEIIRKRPPTQKGLKLEEVRKMEFLSKVIDETMRVITFSLVVFREAKSDVNINGYTIPKGWKVLVWFRSVHLDPEIYPNPKEFNPYRWNEVHKAGEFLPFGAGTRLCPGNDLAKLEISVFLHHFLLNYELEQLNPKSPIRFLPHTRPMDNCLARIKKRLSA* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01380 492 CDD CYP90-like 78 488 - -
Rops11g01380 492 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01380 492 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01380 492 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01380 492 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01380 492 Pfam Cytochrome P450 46 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01380 492 PANTHER CYTOCHROME P450 26 42 474 - -
Rops11g01380 492 SUPERFAMILY Cytochrome P450 38 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01380 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Rops11g01380 492 Gene3D Cytochrome P450 36 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01380 492 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01380 492 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01380 492 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01380 492 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g01380 492 FunFam Ent-kaurenoic acid oxidase 36 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01380 Rops-Chr11 20471934 20476952 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01380 2 490 Cytochrome P450 AT2G32440 66.122 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01380 K04123 - gmx:100781238 820.846