Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01375 ATGGACAGTGCAAGTTGCAATGGCAAGTACTGCTGCGAGACTTCTCTGCCGTTGTATCTTTCAGAATATAACGCAACAATTCAAGATCTAAGTAAAGATCATGTGGGCGATCAGTGCAGATGGGCGCTGATTCTTCAATCATATTCAGATTCGTATTATCAAAATATTGGTTCACTAAAGGATGCAAAACATGTTCCTGCGGTGCTTGAGTGGGAGATTCCAAACAATTCGACCCTGAAACTCCCAGTAGCTGAATTTTCCTACTGTCATGCCACTAATGTTACATCTTCACTAAACACAAACTCAGGCTCGAGATGTAGCTGCAATGATAGCTTTTATGGCAATCCCTACGTCACTGGAGGCTGTAAAGGGGTGAACGATTACAAAAACAAAAGTCGAGCGAAGTGGGCCATCGTTGGTATTTGTTCAAGCATCGGATCTGTCATTTTAATTCTTGGTCTTCGGCAGTTGTATAAAGTTGTAAGGAGAAAAATTGTAAAGAAAAAAAATTTCAAACAAAATGGAGGCTTGTTGTTAGAACAAAGATTATCTTATGGTGAAGTTAATGTTGACAAAACTAAAATTTTCACCTTAAAGGAATTAGAGAAGGCCACAAATCACTTTAATGTGAACAAAGTACTTGGAAAGGGAGGTCAAGGTACCGTTTACAAGGGCATGCTAGCAGATGGAAAAATTGTTGCAGTGAAAAAGTTTAAGGTCCAAGGAAGTGTTGAAGAATTCATCAATGAGTTTGTCATTCTTTCGCAAATTAACCATAGAAATGTGGTTAAGTTGTTAGGATGTTGTTTGGAGACAGAAATTCCCTTGCTTGTTTATGAATTCATTCCTAATGGTAACCTTTTCGAATATTTGCATGGACAAAATGATGACTTACCACCAATGACATGGGATATGCGTCTGAGAATTGCCACCGAAGTTGCAGGAGCTCTATTTTACTTACACTCAGCTGCTTCTCTTCCCATTTATCACAGGGATGTCAAATCAACAAATATACTGCTAGATGAAAAGTATAAGGCAAAGGTAGCAGACTTTGGTACATCAAGAATGGTTTCCATTGAAGATACTCACCTAACCACAATAGTTCGAGGTACTTTTGGATACTTGGACCCTGAATATTTCAATACTAGTCAATTCACAGATAAAAGTGATGTCTATAGTTTTGGGGTAGTGCTTGTTGAACTTTTGACTGGGCTAAAGCCAGTATCCTCCCTAAGACCAGAAGAAGCCAAAAGTTTAGGTTCATATTTCATTCTCTCTATGGAGCAAAATCGTTTGTTTGATATTCTTGACGAAAGAGTCATGAAGGAAGGGGAGAAAGAACATATTATTACAATTGCTAATCTTGCAAGTAGATGCTTAGAGTCTAGTGGGAAAAAACGACCAACTATGAAAGAAGTCACATTAGTATTATATGGTGTCCGGAAATTGGTTGAAAAGGAGCCTAATGCACAAGAAAACCATGAAGAACTTGAGCTTGCTGGAATTGAAGATTACCAATCTGGGGTTGGATACTCTACATCAAGAGTTTGTTCAAGTATTGGATCCATCATTTTACTTCTTGGTCTCTGGCGGTTGTTTAAAGTTGTAAGGAGAAAACTAGAACAGAGACGCAAAGAAAAATTCTTCAAACGAAATGGAGGATTGTTGTTAGAACAAAGATTTTCTTCTGGTGAAGTTAATGTTGACAAAACAAAACTTTTCAACCTAAAGGATTTAAAGAAGGCCACAGATCACTTTAATGTGAACAGAGTACTGGGAAAGGGAGGTCAAGGTACCGTTTACAAAGGCATGCTAGCAGATGGAAAAATTGTTGCAGTAAAAAAGTTTAAGGTCCAAGGAAGTGTTGAAGAATTCATCAATGAGTTTGTCATTCTTTCGCAAATTAACCATAGAAATGTGGTTAAGTTGTTAGGATGTTGTTTGGAGACAGAAATTCCTTTGCTTGTTTATGAATTCGTTCCTAATGGTAACCTTTTCGAATATTTGCATGAACAAAATGATGACTTACCACCAATGACATGGGATATGTGTTTAAGAATTGCCACTGAAGTTGCAGGAGCTCTATTTTACTTGCACTCAGCTGCTTCTCAACCCATTTATCATAGAGACATCAAATCAACAAATATTCTATTGGATGGAAAGTATAAGGCAAAGATAGCAGACTTTGGTACATCAAGAATGATTTCCATTGAAGCTACCCACCTCACCACAGTAGTTCAAGGTACTTTTGGATACTTGGACCTTGAATATTTCCATACTAGTCAATTTACAGATAAGAGTGATGTCTACAGCTTTGGAGTAGTCCTTGTTGAACTTTTAACTAGGCAAAGGCCAATATCCTCCCTAAGACCACAAGAAGCCAAAAGTTTAGCTTCATATTTTCTTCTCTCTATGGAGGAAAATCATTTGTTTGATATTATCGATGAAAGAGTCATGAAGGAAGGGGAGAAAGAACATATCATTGCAGTTGCCAACCTTGCAAGTAGATGCTTAGAGTTGAATGGGAAAAAGCGACCAACTATGAAAGAAGTCACATTGGAATTAGAAGGGATTCGGAAATTGGCCGAAAGGAAGTCTAATACACAAGAAAACCATGAAGAAATTGAGCTTTCAATTCCTGTAATTGAAAACTACCAACCTTGGATTGGATATTCTACATCAAATCCAATGCCAACTCTAAGCGATGAAACACTCACCTCAGACTCAGAGATTATGCATATTCTTTCATTAGAATAA 2757 0.3754 MDSASCNGKYCCETSLPLYLSEYNATIQDLSKDHVGDQCRWALILQSYSDSYYQNIGSLKDAKHVPAVLEWEIPNNSTLKLPVAEFSYCHATNVTSSLNTNSGSRCSCNDSFYGNPYVTGGCKGVNDYKNKSRAKWAIVGICSSIGSVILILGLRQLYKVVRRKIVKKKNFKQNGGLLLEQRLSYGEVNVDKTKIFTLKELEKATNHFNVNKVLGKGGQGTVYKGMLADGKIVAVKKFKVQGSVEEFINEFVILSQINHRNVVKLLGCCLETEIPLLVYEFIPNGNLFEYLHGQNDDLPPMTWDMRLRIATEVAGALFYLHSAASLPIYHRDVKSTNILLDEKYKAKVADFGTSRMVSIEDTHLTTIVRGTFGYLDPEYFNTSQFTDKSDVYSFGVVLVELLTGLKPVSSLRPEEAKSLGSYFILSMEQNRLFDILDERVMKEGEKEHIITIANLASRCLESSGKKRPTMKEVTLVLYGVRKLVEKEPNAQENHEELELAGIEDYQSGVGYSTSRVCSSIGSIILLLGLWRLFKVVRRKLEQRRKEKFFKRNGGLLLEQRFSSGEVNVDKTKLFNLKDLKKATDHFNVNRVLGKGGQGTVYKGMLADGKIVAVKKFKVQGSVEEFINEFVILSQINHRNVVKLLGCCLETEIPLLVYEFVPNGNLFEYLHEQNDDLPPMTWDMCLRIATEVAGALFYLHSAASQPIYHRDIKSTNILLDGKYKAKIADFGTSRMISIEATHLTTVVQGTFGYLDLEYFHTSQFTDKSDVYSFGVVLVELLTRQRPISSLRPQEAKSLASYFLLSMEENHLFDIIDERVMKEGEKEHIIAVANLASRCLELNGKKRPTMKEVTLELEGIRKLAERKSNTQENHEEIELSIPVIENYQPWIGYSTSNPMPTLSDETLTSDSEIMHILSLE* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01375 918 ProSiteProfiles Protein kinase domain profile. 586 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01375 918 SUPERFAMILY Protein kinase-like (PK-like) 568 855 IPR011009 -
Rops11g01375 918 FunFam Wall-associated receptor kinase 2 660 878 - -
Rops11g01375 918 Gene3D Transferase(Phosphotransferase) domain 1 282 505 - -
Rops11g01375 918 Gene3D Transferase(Phosphotransferase) domain 1 660 884 - -
Rops11g01375 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 706 718 IPR008271 GO:0004672|GO:0006468
Rops11g01375 918 FunFam Wall-associated receptor kinase 2 178 281 - -
Rops11g01375 918 FunFam Wall-associated receptor kinase 2 556 659 - -
Rops11g01375 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 328 340 IPR008271 GO:0004672|GO:0006468
Rops11g01375 918 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 7 487 IPR045274 GO:0007166
Rops11g01375 918 SMART serkin_6 208 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01375 918 SMART serkin_6 586 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01375 918 CDD STKc_IRAK 214 473 - -
Rops11g01375 918 Pfam Protein kinase domain 587 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01375 918 ProSiteProfiles Protein kinase domain profile. 208 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01375 918 SUPERFAMILY Protein kinase-like (PK-like) 189 478 IPR011009 -
Rops11g01375 918 Gene3D Phosphorylase Kinase; domain 1 558 659 - -
Rops11g01375 918 Gene3D Phosphorylase Kinase; domain 1 180 281 - -
Rops11g01375 918 FunFam Wall-associated receptor kinase 2 282 500 - -
Rops11g01375 918 Pfam Protein tyrosine and serine/threonine kinase 210 474 IPR001245 GO:0004672|GO:0006468
Rops11g01375 918 Coils Coil 858 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01375 Rops-Chr11 20377981 20386789 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01375 518 874 Receptor kinase-like Gene Family AT1G69730 58.630 5.84e-145 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Rops11g01375 Pkinase 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01375 - - sspl:121779226 764.992