Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01372 ATGTCTTCCTTAGAAGTTAATGTAGACAAAGGTATTCTCTTCAGCTTGAACGAGTTAAAGAAGGCTACTGATAACTTTAATATGAATAGAATTCTTGGAAAGGGAGGTCAAGGTACTGTTTACAAAGGCATGCTAACAGATGGTAGAATTGTTGCTGTAAAAAAGTTTAAGGTTGAAGAATTCATCAACGAGTTTGTCAAGTTATTAGGATGTTGTTTGGAAACTGAAATTCCCTTACTTGTTTATGAATTCATTCCTAATGGAAATCTTTTTGAATATTTGCAAGACCAAAATGAGGACTTACCAATTACATGGGACATGCGTTTGAGAATTGCCACTGAAATTGCAGGAGTTCTATTTTACTTACACTCAATTGCATCATAG 384 0.3411 MSSLEVNVDKGILFSLNELKKATDNFNMNRILGKGGQGTVYKGMLTDGRIVAVKKFKVEEFINEFVKLLGCCLETEIPLLVYEFIPNGNLFEYLQDQNEDLPITWDMRLRIATEIAGVLFYLHSIAS* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01372 127 Pfam Protein tyrosine and serine/threonine kinase 64 124 IPR001245 GO:0004672|GO:0006468
Rops11g01372 127 ProSiteProfiles Protein kinase domain profile. 26 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01372 127 Gene3D Transferase(Phosphotransferase) domain 1 64 126 - -
Rops11g01372 127 Gene3D Phosphorylase Kinase; domain 1 2 63 - -
Rops11g01372 127 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 12 127 IPR045274 GO:0007166
Rops11g01372 127 SUPERFAMILY Protein kinase-like (PK-like) 8 124 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01372 Rops-Chr11 20324626 20325009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01372 7 127 Receptor kinase-like Gene Family AT1G79670 62.319 4.22e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Rops11g01372 PK_Tyr_Ser-Thr 2.5e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01372 - - gmx:100798794 218.009