Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01363 ATGGATACCATTGTTGAGGAATCTTTTGTTGATCTGAATGATGATGGAGATTTGAATCTGAGTCCTTGTGATGGGTCTGACAGCTCAAGTGACAAATTTCATGAAAATGTGGAACTGAATGACGATGTTTATAAGAGAGTGACAGAGTTGAATAGAGATGAGATTTTAAATTTGGAGTTTGGAAGTGAAAATGAGGCTATAGAATTCTACAGCAAATATGCCATGTGTCATGGATTTGTTGTTAGGAAAGATGATGTGATTAGAGATTTGAAGGGAAATGTTGTAATGCGCCAATTAGTATGCAATAGAGCTGGGTTGAAAAACAAAAAACACATTGAGAGGGTGGATAGAATAAGAGATCATAGACCTATCACACGTACTAACTGTGAAGCTAAGTTTAGGGTTCATGTTGATTACCGGACATTGAAATGGAGGGTTGCATCGTTTGAGGATACACATAATCATCTGCTTACACCATGTGAGCAGGTCCACCTTCTTCCTGCGTATCGTAGGTTGAGTTATGCAGATGAAGCTCAAGTGGACAGCTTGCATCTTTATGGTGTAAGGACTTGTCATATAATGGGTTTCATGCTAGCTCAGAAAGGTGGATATGCAGACTTAGGATTCTGTAAGAAGGATCTATACAATCATCTTGATAAGCAGAGGCGTGCCAAAGTGATGACGGCGATGCATTTGCTGCATTGA 705 0.3943 MDTIVEESFVDLNDDGDLNLSPCDGSDSSSDKFHENVELNDDVYKRVTELNRDEILNLEFGSENEAIEFYSKYAMCHGFVVRKDDVIRDLKGNVVMRQLVCNRAGLKNKKHIERVDRIRDHRPITRTNCEAKFRVHVDYRTLKWRVASFEDTHNHLLTPCEQVHLLPAYRRLSYADEAQVDSLHLYGVRTCHIMGFMLAQKGGYADLGFCKKDLYNHLDKQRRAKVMTAMHLLH* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01363 234 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 219 - -
Rops11g01363 234 Pfam FAR1 DNA-binding domain 68 158 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01363 Rops-Chr11 20211627 20212331 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops11g01363 FAR1 7.2e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01363 - - ccaj:109792835 262.692