Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01350 ATGGATACGCTTATTATCCGTGACGACTATCCGAGTATTAAAGATCTAAATCCTGGAAAACATGTTCGTGCGGTGCTTGAGTGGGAGATTCCAAACCAGATGCTGATCAATTCGACCCTCAAACTCCCTGTAGATGAATTTTCACACTGCAATGCCACTAATGTAACATCTTCACAAAACACAAACTCAGGTTGGAGATGTAGCTGCAATCCTGACTTCGATGGCAATCCCTACATTGATGGAGGCTGTACCGGAGTTTGTTCAAGTATCGGATCCATCATGTTACTTCTTGGTCTTTGGAGATTGTATAAGGTTGTAAGGAGAAAAATGATAAAGAAATGTCAACAAAAATTCTTCAAACGAAATGGAGGTTTGTTGTTAGAACAGAGATTGTGTTCTAGTGAAGTTAATGTTGACAAAGCTAAACTTTTCAGCTTAAAGGACTTAGAGAAGGCCACAGATCACTTTAATATGAACAGAGTACTTGGAAAAGGAGGTCAAGGCACCGTTTTCAATGGCATGCTAGCAGATGGGAAAATTGTTGCAGTGAAAAAGTTTAAGGTCCAAGGAAAGATTGAAGAATTCATTAATGAGTTTGTCATTCTTTCACAAATTAACCACAGAAATGTGGTTAAGTTATTAGGATGGTGTCTGGAGACGGAAATTCCTTTGCTTGTTTATGAATCCATTCCTAATGATAAAAGTGATGTTTATAGCTTTGGAGTAGTTCTTGTTGAACTTTTAACTGGGCAAAGACCAATATCCTCCCTAAGATCAGAAGAAGCAAAAAGTTTGGCTTCATATTTCATTCTCTCCAAGGAGGAAAATCGTCTTTTCGATATTATTGATGAAAGAGTCATAAAGGAAGGGGAGAAAGAACATATCATTACAGTTGCCAACCTTGCAAGTAGATGCTTAGAGTTGAATGGAAAAAAACGACCAACTATGAAAGAAGTTGCATTGGACTTGGAAGGGATCGGGAAATTGGTTGAAAGGAAGTCTAATGTACAAGAGAACAAAGAAGAAATTGAGCTTGCAATTGCTGAAATGGAAACTAACAACCATGGATTGGAGATTCTACATCAAATTTGTTGCCAACTCTAA 1104 0.3777 MDTLIIRDDYPSIKDLNPGKHVRAVLEWEIPNQMLINSTLKLPVDEFSHCNATNVTSSQNTNSGWRCSCNPDFDGNPYIDGGCTGVCSSIGSIMLLLGLWRLYKVVRRKMIKKCQQKFFKRNGGLLLEQRLCSSEVNVDKAKLFSLKDLEKATDHFNMNRVLGKGGQGTVFNGMLADGKIVAVKKFKVQGKIEEFINEFVILSQINHRNVVKLLGWCLETEIPLLVYESIPNDKSDVYSFGVVLVELLTGQRPISSLRSEEAKSLASYFILSKEENRLFDIIDERVIKEGEKEHIITVANLASRCLELNGKKRPTMKEVALDLEGIGKLVERKSNVQENKEEIELAIAEMETNNHGLEILHQICCQL* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01350 367 Gene3D Phosphorylase Kinase; domain 1 128 224 - -
Rops11g01350 367 ProSiteProfiles Protein kinase domain profile. 156 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01350 367 SUPERFAMILY Protein kinase-like (PK-like) 138 327 IPR011009 -
Rops11g01350 367 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 232 IPR045274 GO:0007166
Rops11g01350 367 Coils Coil 326 360 - -
Rops11g01350 367 Gene3D Transferase(Phosphotransferase) domain 1 225 333 - -
Rops11g01350 367 FunFam Wall-associated receptor kinase-like 10 174 229 - -
Rops11g01350 367 Pfam Protein kinase domain 157 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01350 Rops-Chr11 20037224 20048068 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01350 187 258 Receptor kinase-like Gene Family AT1G16110 38.889 4.49e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Rops11g01350 Pkinase 5.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01350 - - gmx:100801993 298.516