Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01348 ATGATTTCCATCGAAGCTACTCACCTCACCACAGTAGTTCAAGGTACTTTTGGATACTTGGACCCTGAATATTTCCATACTAGTCAATTTACAGATAAGAGTGATGTTTATAGCTTTGGAGTAGTTCTTGTTGAACTTTTAACTGGTCAAAAAGCAATATCTTCTGAAAGATCAGATGAAGCTAAAAGTTTAGCTTCATATTTAACTCTCTCTATGGAGGAAAATCGTCTGTTTGATATTATTGATGAATGGGTCATGAAGGAAGGGGAGAAAGAGCATATCATTGCAGTTGCCAACCTTGCAAGAAGATGCTTAGAGTTGAATGGAAAAAAACGACCAACTATGAAAGAAGTTACATTAGAATTAGAAGGGATTCAGAAATCGGTTGGAAGGAAGTCAAACGCAAATGAAAACCATGAAGAAATTGAGCTTGCAATTGCTGGAATTGAAAACTACCAACCTTGA 465 0.3634 MISIEATHLTTVVQGTFGYLDPEYFHTSQFTDKSDVYSFGVVLVELLTGQKAISSERSDEAKSLASYLTLSMEENRLFDIIDEWVMKEGEKEHIIAVANLARRCLELNGKKRPTMKEVTLELEGIQKSVGRKSNANENHEEIELAIAGIENYQP* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01348 154 SUPERFAMILY Protein kinase-like (PK-like) 7 120 IPR011009 -
Rops11g01348 154 Pfam Protein kinase domain 8 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01348 154 Gene3D Transferase(Phosphotransferase) domain 1 2 151 - -
Rops11g01348 154 ProSiteProfiles Protein kinase domain profile. 1 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01348 154 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 134 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01348 Rops-Chr11 20025509 20025973 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01348 2 130 Receptor kinase-like Gene Family AT1G69730 57.364 1.66e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Rops11g01348 Pkinase 3.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01348 - - gmx:100775935 223.787