Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01346 ATGATAAAGAAACGTAAAGCAAAATTCTTCAAACGAAATGGAGGTTTGTTGTTAGAACAAAGATTATCTTCTACTAAAGTTAATGTTGACAGAGCTAAACTTTTTAGCTTAAAGGACTTAGAAAAAGCAACAGATCACTGTAATATGAACAGAGTTCTTGGAAAGGGAGGTCAAAGCACCGTTTTCAAGGGCATACTAGCAGATGGGAAAATTGTTGCAGTGAAAAAGTTTAAGGTCCAAGGAAAGATTGAAGAATTCATCAATGAGTTTGTCATTCTTTCACAAATTAACCACAAAAACGTGGTTAAGTTGTTAGGATGTTGTTTGGAGACAGAAATCCCTTTACTTGTTTATGAAGTCATTCCTAATGAAGAAGTCAAAAGTTTGGCTTCATATTTCATTCTCTCCATGGAGGAAAATTATCTGTTTGATATTATTGATGAAAGAGTCACAAAGGAAGGGGAGAAAGGACATATCATCACAGTTGCCAACCTTGCAAGTAGATGCTTAGATTTGAATGAGAATAAACGACCAACTATGAAAAAAGTTGCATTGGAATTAGAAGCGATATGGAAATTGGTTGAAAGGAAATCTAATGTACAAGAGAACAAAGAAGAAACTGAGCTTTCAATTGCCGGAATTGAAGACTATCAACCATGGATTGGAGATTCTACATCAAATTCGTTGCCAACTCTAAGCACCGGAACGCTCTCATCAAACTCAGAGGTTATGCATATTATTGCATTAAAATAA 753 0.3493 MIKKRKAKFFKRNGGLLLEQRLSSTKVNVDRAKLFSLKDLEKATDHCNMNRVLGKGGQSTVFKGILADGKIVAVKKFKVQGKIEEFINEFVILSQINHKNVVKLLGCCLETEIPLLVYEVIPNEEVKSLASYFILSMEENYLFDIIDERVTKEGEKGHIITVANLASRCLDLNENKRPTMKKVALELEAIWKLVERKSNVQENKEETELSIAGIEDYQPWIGDSTSNSLPTLSTGTLSSNSEVMHIIALK* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01346 250 SUPERFAMILY Protein kinase-like (PK-like) 27 129 IPR011009 -
Rops11g01346 250 Pfam Protein kinase domain 50 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01346 250 FunFam Wall-associated receptor kinase 2 17 120 - -
Rops11g01346 250 ProSiteProfiles Protein kinase domain profile. 47 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01346 250 Gene3D Phosphorylase Kinase; domain 1 19 120 - -
Rops11g01346 250 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 126 197 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01346 Rops-Chr11 19998061 19998898 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01346 5 126 Receptor kinase-like Gene Family AT1G16110 66.129 2.61e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Rops11g01346 Pkinase 3.9e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01346 - - ahf:112741505 241.891