Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01338 ATGTCTTCAGGAGAAGTTAATGTTGACAAAGGTATTATCTTCAGTTTGAATGAGTTGAAGAAGGTTACTGAGAACTTTAACATGAACAGAATTCTTGGAAAGGGAGGTCAAGGTACCGTTTACAAAGGCATGCTTGTAGATGGTAGGATTGTTGCGGTGAAAAAGTTTAAGGTTGAAGGAAAGGTTGAAGAATTCATCAACGACTTTATCATTCTTTCACAAATTAACAACAGAAATGTGGTCAAGTTATTAGGATGTTGTTTGGAAACAGAAATTCCCTTACTTGTTTATGAATTCATTCCTAATGGAGCTCTATTTTACTTACACTCAGTTGCATCTCAGCCCATTTATCACAGGGATATCAAATCAACAAATATACTGTTAGATGAAAAGCATAGGGAAAAATTAGCTGATTTTGGAACATCCAGAATAATTTCCATTGAAGCTACTCACCTCACCACAGTAGTTCAAGGTACTTTTGGATACTTGGACCCGGAGTATTTTCATACTAGTCAATTTACAGAAAAAAGTGATGTCTACAGCTTTGGAGTAGTTCTCGTAGAACTTTTAACTAGTCAGAAGCCAATATCCTCAGCAAGATCTGGGGAAGCCAAGAGTTTAGCTTTATATTTTGCCCAATGTATGGAGGAGAATAGTGTATTTGGCCTTATTGACAAAAGAGTTATGAAGGAAGGGAAGAAAGAAAATATCATTGCAGTTGCCAATCTTGCAAATAGATGCTTAGAGTTAAATGGGAAAAAACGACCAACTATGAGAGAAGTCACATTAGAACTAGAAAGGATTCGGGGATTTGAAAGGAAGTCTAGTGCGCAGCAAAACCACGAAGAAATCGAGCTTGCAGTTGGTTGA 870 0.369 MSSGEVNVDKGIIFSLNELKKVTENFNMNRILGKGGQGTVYKGMLVDGRIVAVKKFKVEGKVEEFINDFIILSQINNRNVVKLLGCCLETEIPLLVYEFIPNGALFYLHSVASQPIYHRDIKSTNILLDEKHREKLADFGTSRIISIEATHLTTVVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLVELLTSQKPISSARSGEAKSLALYFAQCMEENSVFGLIDKRVMKEGKKENIIAVANLANRCLELNGKKRPTMREVTLELERIRGFERKSSAQQNHEEIELAVG* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01338 289 Gene3D Phosphorylase Kinase; domain 1 2 99 - -
Rops11g01338 289 Gene3D Transferase(Phosphotransferase) domain 1 103 288 - -
Rops11g01338 289 FunFam Os04g0517700 protein 99 287 - -
Rops11g01338 289 ProSiteProfiles Protein kinase domain profile. 26 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01338 289 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
Rops11g01338 289 SUPERFAMILY Protein kinase-like (PK-like) 10 265 IPR011009 -
Rops11g01338 289 FunFam Wall-associated receptor kinase-like 10 44 99 - -
Rops11g01338 289 SMART serkin_6 26 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01338 289 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 103 279 IPR045274 GO:0007166
Rops11g01338 289 PIRSF ILK 104 283 - -
Rops11g01338 289 PIRSF ILK 15 106 - -
Rops11g01338 289 Pfam Protein kinase domain 104 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01338 Rops-Chr11 19776766 19777722 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01338 7 269 Receptor kinase-like Gene Family AT1G79670 60.544 5.56e-120 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Rops11g01338 Pkinase 5.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01338 - - mtr:11415953 454.521