Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01314 ATGGTTAAGAGCTTTTGTGGAATTTTAAACATGTCAAGTAAGATGGACTTCCCACAACATTTTATTGAGGAGGAAAATAGTGGGGTTAGGATCTCTTTTAGAAAAAACAATGACCCTGGCCTTCAAAATGACATGATTATCGTCATTGTTGCTACCTCATTGTGGCTTCCTCTCCCTTCTCAAAATCTTTTCGAATTTTTCAATGATCCGACAAAACGTGTTAAGTGGGATGTTATTTGTTGTGTAAATCCAGTGCACGAGATTGCACGCATCTCAAATGGAACTTATCCTAGCAATTACATATCAATTATTCAGCCTGACAACCCTATTGCAAGTCATGTGATGATTATCCAAGAAAGTTTTATAGATCCCTTGGGATCCTATGTGATATATTCGCCAATTAATATATCAGACGTAAATATGGCTATGAATGGCGATGACCCATCAACAACATCAATTCTTCCATCAGGGGTGGTCATCTCAGAAGATAGTAGAAATAGTGAAGGAAGCACTAGAGGTTCACTGTTGACTGTGGCTTTTCAAATTATCATGTCTAGTCCAGCCGCAATGAATTTAGAATCTATAGCTTCTATTAATTCACTAATAACTTCTACAATCCAAAACATCAAGGATGCTTTGATCAATGATTCTGTTTTGGAGTAA 663 0.368 MVKSFCGILNMSSKMDFPQHFIEEENSGVRISFRKNNDPGLQNDMIIVIVATSLWLPLPSQNLFEFFNDPTKRVKWDVICCVNPVHEIARISNGTYPSNYISIIQPDNPIASHVMIIQESFIDPLGSYVIYSPINISDVNMAMNGDDPSTTSILPSGVVISEDSRNSEGSTRGSLLTVAFQIIMSSPAAMNLESIASINSLITSTIQNIKDALINDSVLE* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01314 220 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 213 IPR042160 -
Rops11g01314 220 SUPERFAMILY Bet v1-like 24 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01314 Rops-Chr11 19269563 19271204 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01314 1 213 Homeobox Transcription Factor Family AT5G17320 43.498 1.41e-46 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01314 K09338 - gmx:100794552 248.054