Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01306 ATGAAGCTCTTTAGCCTTTTAGTGTTATCTTTACCTTTTTTCTCCGTTATGGGGCAGCTTCCTTCCCAGGACATTTTAACATTGCTGGAATTTAAAAAAGGCATAAAACATGACCCTACTGGTTTTGTCCTCAATTCTTGGAATGAGGAATCCATTGACTTTGATGGATGCCCATCTTCATGGAATGGAATTGTGTGTAATGGTGGTAATGTTGCCGGGGTTGTCCTTGATAACTTGGGTCTCTCTACTGATGCTGACTTAAGTGTTTTTTCAAACCTCACAAAGCTTGTGAAACTCTCCATGGCTAACAATTTCATATCAGGAAAACTACCTGACAATGTTGCTGATTTCAAAAGCCTTGAATTCCTAGATATCTCCAACAACCTCTTTTACTCATCCTTACCATCGAGAATTGGTGACTTTGGTAGCTTGCAGAATCTGTCATTGGCTGGGAATAACTTCTCTGGCCCAATTCCTAACTCCATTTCAGAAATGGCTTCCATCAAATCGTTGGACTTGAGCCGCAACTCCTTTTCGGGAGCGGTGCCAGCATCATTGACTGAGCTGACTAGCCTTGTATCTCTTAACTTGTCTCATAATGGCTTCACTGGCAAAATTCCCAAAGGTTTTGATCAGATCTCTGCCCTTGAAAAACTTGATTTGCACGGGAATAAGCTTGATGGTCCTTTAGATGTTGAATTTATGTTTTTATCCAGTGCCAGCTATGTTGATTTCAGTGATAACATGCTGGTGAGTTCCGACTCCCAGCAGCAGAAGTTTCTATCACGGATATCTGAAAGTATCAAGCATCTGAATTTAAGTCACAACCAATTTACTGGGTCATTGGTTGGCGGAGCTGAGGCACCTATTTTCCAAAACTTGAAGGTGTTGGACCTCAGCTACAATCAATTGAACGGAGAGTTGCCTGAATTTGATTTCATTTATGATCTCCAGGTCCTTAAGCTTAGCAACAATAGATTTTCAGGATTTATTCCTAATGGGCTACTAAAAGGAGACTCTTTGGTTTTATCTGAACTGGATTTGAGTGCCAACAATCTCTCAGGGCCATTAAGTATAATTACATCAACGACACTTCACTATCTCGATCTCTCATCAAATGGGTTCACTGGTGAGCTGCCACTGCTGACTGGAAGCTGTGCTGTACTTGATCTGTCAAATAACAGATTAGAAGGAAATTTAACCAGGATGTTGAAATGGGGGAATATAGAATATCTCGATCTCAGTGGGAATCATTTGACAGGGACCATCCCTGAAGTAACTGCTCAATTTTTGCGATTAAATTATTTGAATCTATCCCATAATTCTCTTAGCAGCTCCCTCCCAAGAGTCTTAACACAGTATCCAAAGCTTAGAATGCTTGATATCAGTTCCAACCAATTAGATGGCCTAATTCTTGCTGATCTGCTCACATTGCCCACATTAGAAGAGCTCCATCTTGAAAATAATATGATCTCTGGTGGCATCAATTTATCATCTTCTCTAGGCCAATCTCATCTTCAAATTATTGATCTTTCTCACAACCAGCTTAATGGCTATTTCCCTGATGAGTTTGGATCACTAACTGGCCTGAAAGTGCTCAATATTGCTGGAAATAATTTTTCTGGTTCTCTGCCAACCACCATTGCTGACATGAATTCTCTAGATTCTCTGGATATATCAGAGAATCATTTTACTGGTCCTCTTCCAAATAACATGCCAAAGGGGCTCAAAAACTTCAACGCTTCACAAAATGAGCTGTCTGGAGTTGTCCCTGCAATTCTTAGGAAGTTCCCTAGTTCTTCTTTCTTTCCTGGGAATTCTAATTTACATTTTCCAAATGGTCCTCCTGGATCAACCACTTCTCCTACTGAAAGTTCCAAGAGGAAGTCTATGAACACTGTGGTTAAAGTAATAATTATAGTGTCATGTGTGGTTGCTCTCTTCATATTAATCTTGCTGGCTGTCTTCATACACTACATACGAATGTCAAGATCTACTCCACCAGAATATGATACAAGTAAGGAAATCCGTGCACGTCCTCAACCAATTATCTCTGGCCCAGTTCGTGCGACAGACAGGGGTGGTCCTTTGGTTGTATCAGCTGAGGACCTTGTGACTGCACGTAAAGGGTCACCATCAGAGGTAACCAGCCCTGATGAAAAAACGGCAGCTGCAGCTGGGTTCTCTCCATCAAAACAAAGCCACTTTTCATGGTCACCAGAGTCTGGTGATTCACTTACTGCTGAAAATCTTGCAAGACTAGATACAAGATCACCAGATAGGTTGATTGGAGAGCTGCATTTTCTTGATGATACAATATCATTGACACCTGAGGAGCTCTCGAGGGCCCCGGCTGAAGTTTTGGGCAGAAGTAGTCATGGTACTTCTTACAAGGCAACTCTAGACAATGGGTTGTTGTTGAGAGTGAAGTGGTTGAGAGAAGGAGTGGCAAAACAGAGGAAAGAATTTGTTAAAGAGATGAAAAAGTTTGCTAACATAAGGCATCCAAATGTTGTGGGACTGAGAGGATATTATTGGGGTCCTACCCAGCATGAGAAGCTCATTCTTTCAGATTACATTTCACCAGGAAGTCTTGCAAGTTTCCTTTATGATCGACCAGGAAGAAAAGGTCCACCATTAACTTGGGCACAGAGGCTCAAAATAGCAGTTGATGTAGCACGTGGCCTAAACTATCTCCATTTTGATCGTGCTGTTCCTCATGGAAACCTTAAAGCCACAAATGTGTTATTAGATACAACCGACATGAATGCACGTGTTGCTGACTACTGTCTCCACCGACTCATGACTCAAGCTGGCACCATTGAACAGATTCTTGATGCCGGGGTCTTGGGATATCGCGCACCAGAGTTAGCTGCTTCCAAGAAGCCAATGCCCTCCTTCAAGTCAGATGTTTATGCATTTGGGGTGATACTCTTGGAACTTCTAACTGGAAGGTGTGCTGGTGATGTGATTTCTGGTGAGGATGGAGGTGTTGATCTTACAGATTGGGTAAGGTTGCGTGTAGCCGAAGGTAGAGGCTCAGAATGTTTTGATGCTACATTGATGTCAGAAATGGGAAATGCAGTTGTAGAGAAGGGAATGAAGGAGGTTCTAGGAATAGCTATTAGATGCATTAGATCAGTTTCTGAAAGGCCTGAAGGGAACAAGCTCCAAAAGGAACGAAGCCCTAGTCGTGAGTGCAGAGTCCCAATCGCCGCCGGCCACCGTCTAGTGTCCGTACCAGATTTCAGCCGCCGCCAGTCCACGTCACCGCTGAGAAGGGATTAA 3288 0.4267 MKLFSLLVLSLPFFSVMGQLPSQDILTLLEFKKGIKHDPTGFVLNSWNEESIDFDGCPSSWNGIVCNGGNVAGVVLDNLGLSTDADLSVFSNLTKLVKLSMANNFISGKLPDNVADFKSLEFLDISNNLFYSSLPSRIGDFGSLQNLSLAGNNFSGPIPNSISEMASIKSLDLSRNSFSGAVPASLTELTSLVSLNLSHNGFTGKIPKGFDQISALEKLDLHGNKLDGPLDVEFMFLSSASYVDFSDNMLVSSDSQQQKFLSRISESIKHLNLSHNQFTGSLVGGAEAPIFQNLKVLDLSYNQLNGELPEFDFIYDLQVLKLSNNRFSGFIPNGLLKGDSLVLSELDLSANNLSGPLSIITSTTLHYLDLSSNGFTGELPLLTGSCAVLDLSNNRLEGNLTRMLKWGNIEYLDLSGNHLTGTIPEVTAQFLRLNYLNLSHNSLSSSLPRVLTQYPKLRMLDISSNQLDGLILADLLTLPTLEELHLENNMISGGINLSSSLGQSHLQIIDLSHNQLNGYFPDEFGSLTGLKVLNIAGNNFSGSLPTTIADMNSLDSLDISENHFTGPLPNNMPKGLKNFNASQNELSGVVPAILRKFPSSSFFPGNSNLHFPNGPPGSTTSPTESSKRKSMNTVVKVIIIVSCVVALFILILLAVFIHYIRMSRSTPPEYDTSKEIRARPQPIISGPVRATDRGGPLVVSAEDLVTARKGSPSEVTSPDEKTAAAAGFSPSKQSHFSWSPESGDSLTAENLARLDTRSPDRLIGELHFLDDTISLTPEELSRAPAEVLGRSSHGTSYKATLDNGLLLRVKWLREGVAKQRKEFVKEMKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTTDMNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPMPSFKSDVYAFGVILLELLTGRCAGDVISGEDGGVDLTDWVRLRVAEGRGSECFDATLMSEMGNAVVEKGMKEVLGIAIRCIRSVSERPEGNKLQKERSPSRECRVPIAAGHRLVSVPDFSRRQSTSPLRRD* 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01306 1095 SUPERFAMILY L domain-like 267 398 - -
Rops11g01306 1095 MobiDBLite consensus disorder prediction 727 742 - -
Rops11g01306 1095 Gene3D Ribonuclease Inhibitor 258 627 IPR032675 -
Rops11g01306 1095 FunFam Leucine-rich repeat receptor-like protein kinase 767 859 - -
Rops11g01306 1095 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 383 615 - -
Rops11g01306 1095 Gene3D Ribonuclease Inhibitor 184 257 IPR032675 -
Rops11g01306 1095 ProSiteProfiles Protein kinase domain profile. 782 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01306 1095 SMART LRR_typ_2 551 575 IPR003591 -
Rops11g01306 1095 SMART LRR_typ_2 117 141 IPR003591 -
Rops11g01306 1095 SMART LRR_typ_2 189 212 IPR003591 -
Rops11g01306 1095 SMART LRR_typ_2 478 504 IPR003591 -
Rops11g01306 1095 SMART LRR_typ_2 527 550 IPR003591 -
Rops11g01306 1095 SMART LRR_typ_2 291 313 IPR003591 -
Rops11g01306 1095 SMART LRR_typ_2 430 453 IPR003591 -
Rops11g01306 1095 SMART LRR_typ_2 314 338 IPR003591 -
Rops11g01306 1095 Gene3D Transferase(Phosphotransferase) domain 1 861 1067 - -
Rops11g01306 1095 MobiDBLite consensus disorder prediction 708 742 - -
Rops11g01306 1095 MobiDBLite consensus disorder prediction 608 628 - -
Rops11g01306 1095 Gene3D Phosphorylase Kinase; domain 1 774 859 - -
Rops11g01306 1095 Gene3D Ribonuclease Inhibitor 22 183 IPR032675 -
Rops11g01306 1095 PANTHER OS07G0626500 PROTEIN 7 1053 - -
Rops11g01306 1095 FunFam LRR receptor-like serine/threonine-protein kinase GHR1 20 261 - -
Rops11g01306 1095 ProSiteProfiles Leucine-rich repeat profile. 293 315 IPR001611 GO:0005515
Rops11g01306 1095 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Rops11g01306 1095 Pfam Leucine Rich repeat 362 378 IPR001611 GO:0005515
Rops11g01306 1095 Pfam Leucine Rich repeat 292 307 IPR001611 GO:0005515
Rops11g01306 1095 Pfam Protein tyrosine and serine/threonine kinase 786 983 IPR001245 GO:0004672|GO:0006468
Rops11g01306 1095 FunFam Pollen receptor-like kinase 1 860 1066 - -
Rops11g01306 1095 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
Rops11g01306 1095 Pfam Leucine rich repeat 143 201 IPR001611 GO:0005515
Rops11g01306 1095 Pfam Leucine rich repeat 504 564 IPR001611 GO:0005515
Rops11g01306 1095 SUPERFAMILY Protein kinase-like (PK-like) 785 1024 IPR011009 -
Rops11g01306 1095 SUPERFAMILY RNI-like 99 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01306 Rops-Chr11 19167965 19176628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01306 94 549 Receptor kinase-like Gene Family AT4G36180 32.751 7.70e-46 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops11g01306 PK_Tyr_Ser-Thr 1.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01306 - - gmx:100793639 1736.47