Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01281 ATGAGCTCTCTTCGTCTCACACTGACGGTTTTGTGCTGTGTAGCGGTTGTGCTAGGAGGGTTACCCTTCTCCTCCAATGCACAACTTGATCCCTCGTTTTACAGGAATACCTGTCCTAAGGTCCATTCAATTGTACGTGAAGTCGTGAGGGAAGTTTCTAAGAAAGATCCCCGAATGCTTGCCAGTCTCATCAGGCTTCACTTTCATGACTGTTTTGTTCAAGGCTGTGATGCATCCATTTTGTTGAACAAAACTTCTACAATGGAGAGCGAGCAAGATGCAGCACCAAACCAAAACTCCATAAGAGGTTTGGATGTGGTGAATCAGATCAAGACAGCGGTGGAAAAGGCTTGTCCTGGCATAGTTTCTTGTGCTGATATTCTTACCCTTGCTTCTGAAATATCTTCTATTCTGGCTGGTGGTCCAGATTGGAAAGTTCCATTGGGAAGAAGGGATAGTTTAACAGCCAACAAAACTCTTGCTAATCAAAATCTTCCAGGTCCCTCTTTCATCCTAACTCGACTTAAATCCGCCTTTAAAGCTCAAGGCCTCGACACTACTGATTTAGTTGCACTCTCAGGTGCTCATACATTTGGCAAGTCTCGCTGCTCTTTATTCAGTGACCGATTGTACAACTTCAACGGTACTGGCAAACCTGACCCAACTCTTGACACAAATTATTTAACAGAATTGCGTAAAATATGCCCCAATGGTGGACCTGGGACTACTCTCACCAATTTGGACGTGACCACTCCTATTATATTCGACTCCAAGTACTACTCCAATCTTCAGGCTAAAAAGGGATTGCTTCAGAGTGACCAAGAGCTGTTTTCAACACCTGGTGCAGATACCATTAGCATTGTCAACAAGTTCAGTGGTAACCAAAATGCTTTCTTTGACAGCTTTAAAACTGCAATGATTAAAATGGGTAATATCGATGTGCTAACGGGGAAGAAAGGAGAAATTCGAAAACATTGCAACTTTGTTAACAAAAAGTCTGCCGAACTAGACATAACCAATGTGGCATCAAAAGAATCATCAGAGGAGGGTATGGTTAGCTCAATCTAA 1068 0.4279 MSSLRLTLTVLCCVAVVLGGLPFSSNAQLDPSFYRNTCPKVHSIVREVVREVSKKDPRMLASLIRLHFHDCFVQGCDASILLNKTSTMESEQDAAPNQNSIRGLDVVNQIKTAVEKACPGIVSCADILTLASEISSILAGGPDWKVPLGRRDSLTANKTLANQNLPGPSFILTRLKSAFKAQGLDTTDLVALSGAHTFGKSRCSLFSDRLYNFNGTGKPDPTLDTNYLTELRKICPNGGPGTTLTNLDVTTPIIFDSKYYSNLQAKKGLLQSDQELFSTPGADTISIVNKFSGNQNAFFDSFKTAMIKMGNIDVLTGKKGEIRKHCNFVNKKSAELDITNVASKESSEEGMVSSI* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01281 355 Gene3D - 33 330 - -
Rops11g01281 355 PANTHER PEROXIDASE 72-RELATED 26 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 FunFam Peroxidase 166 309 - -
Rops11g01281 355 Gene3D Peroxidase, domain 2 166 309 - -
Rops11g01281 355 Pfam Peroxidase 45 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 SUPERFAMILY Heme-dependent peroxidases 28 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 FunFam Peroxidase 32 175 - -
Rops11g01281 355 ProSiteProfiles Plant heme peroxidase family profile. 28 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01281 355 CDD secretory_peroxidase 28 329 IPR033905 GO:0004601|GO:0042744
Rops11g01281 355 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01281 Rops-Chr11 18793240 18796636 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01281 15 355 Peroxidase AT2G38380 55.652 3.04e-138 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01281 K00430 - gmx:547499 553.518