Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01279 ATGAGTTCCATGCGTCATGGAGTGGTGGCACTTTGGTGTGCATTGGTGGTGATGCAGGCAGGGTTTTCAGTCTCATATGCTCAGCTCAGTCCCACGTTCTACAGCGAAACATGTCCATTCCTAAACAATATTGTGTTTGGAGTCATCTTCGATGCTTCCCTCACCGATCCACGAATTGGTGCGAGTCTCATGAGGCTTCATTTTCATGATTGCTTTGTTCAAGGTTGTGATGGATCAGTTTTGTTGAACAACACTGCTACGATTGAAAGCGAGCAAGATGCTGCGCCAAATAACAACTCAATAAGGGGTTTGGACGTGGTCAATAACATCAAGACAGTGGTGGAAGAACTTTGTCCAGCCACAGTTTCTTGTGCTGATATTCTTGCTATTGCATCCCAAGTAGCTTCTGTTCTGGGAGGAGGTCCCTCATGGTCAATTCCATTAGGAAGAAGGGATAGCTTAACGGCAAATCGTACCCTTGCAAATCAAAACCTTCCAGCACCCTTCTTCACGCTGGATCAACTTAAAGCTTCCTTTGCTGTTCAAGGTCTCAACACTACTGATTTGGTTACACTATCAGGTGGTCATACATTTGGAAGAGCTCACTGCAGTACATTCATCAACCGATTATACAATTTCAACAACACTGGAAATCCTGATCCAACTCTGAACACAACTTACTTACAAACATTGCGTGTGATATGCCCCCAGAATGGAACTGGGAACAATCTCACCAATTTGGACCTGTCCACACCTGATCGAGTTGATAATAACTACTATTCCAATCTTCAGAGGCTCAATGGCTTACTTCAGAGCGATCAAGAGCTATTCTCTACTCCTGGTGCAGATACCATTGCCATTGTCAATAACTTCAGTAGTGACCAGGGTCTCTTCTTTCGCAATTTCAGGGCCTCGATGATAAAAATGGGTAATATTGGAGTGCTAACGGGGGGTGAAGGAGAAATCCGATTGCAATGTAATTTTGTGAATGGAGATTCATCTGGATTAACTGATGTTGCATCCAAAGATTCTAAAGATGTTCTGGTTAGCTCGATCTAA 1059 0.4363 MSSMRHGVVALWCALVVMQAGFSVSYAQLSPTFYSETCPFLNNIVFGVIFDASLTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTATIESEQDAAPNNNSIRGLDVVNNIKTVVEELCPATVSCADILAIASQVASVLGGGPSWSIPLGRRDSLTANRTLANQNLPAPFFTLDQLKASFAVQGLNTTDLVTLSGGHTFGRAHCSTFINRLYNFNNTGNPDPTLNTTYLQTLRVICPQNGTGNNLTNLDLSTPDRVDNNYYSNLQRLNGLLQSDQELFSTPGADTIAIVNNFSSDQGLFFRNFRASMIKMGNIGVLTGGEGEIRLQCNFVNGDSSGLTDVASKDSKDVLVSSI* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01279 352 SUPERFAMILY Heme-dependent peroxidases 28 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops11g01279 352 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01279 352 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01279 352 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01279 352 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01279 352 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01279 352 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01279 352 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01279 352 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01279 352 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01279 352 PANTHER PEROXIDASE 72-RELATED 26 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01279 352 Gene3D - 33 330 - -
Rops11g01279 352 FunFam Peroxidase 32 176 - -
Rops11g01279 352 ProSiteProfiles Plant heme peroxidase family profile. 28 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01279 352 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01279 352 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01279 352 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01279 352 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01279 352 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01279 352 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Rops11g01279 352 Gene3D Peroxidase, domain 2 166 309 - -
Rops11g01279 352 FunFam Peroxidase 166 309 - -
Rops11g01279 352 CDD secretory_peroxidase 28 329 IPR033905 GO:0004601|GO:0042744
Rops11g01279 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Rops11g01279 352 Pfam Peroxidase 53 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01279 Rops-Chr11 18722682 18725401 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01279 15 331 Peroxidase AT5G06720 59.937 2.12e-136 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01279 K00430 - gmx:548068 565.844