Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01276 ATGAGTTCCATGCGTCATGTAGTAGTGGCACTTTGGTGTGCAATGGTGGTGATGCATGCAGGGTTTTCAGTCTCATATGCTCAGCTCAGTCCCATGTTTTACAGTGAAACATGTCCAGACCTATACAATGTTGTGTTTGGAGTCATCTTCAATGCTTCCTTCACTGATCCCCGTATCGGTGCCAGCCTCATCAGGCTTCATTTTCATGATTGCTTTGTTCAAGGTTGTGATGGATCAGTTTTATTGAACACCACTGCTACGATTGAGAGTGAGCAAGATGCTGCGCCAAATAACAACTCAATAAGGGGTTTGGATGTTGTGAACGATATCAAGACAGTGGTGGAAGAACTTTGTCCAGCCACAGTTTCTTGTGCTGATATTCTTGCTATTGCATCCCAAGTAGCTTCTGTTCTGGTATGTCCTAAGTCCTAA 432 0.4398 MSSMRHVVVALWCAMVVMHAGFSVSYAQLSPMFYSETCPDLYNVVFGVIFNASFTDPRIGASLIRLHFHDCFVQGCDGSVLLNTTATIESEQDAAPNNNSIRGLDVVNDIKTVVEELCPATVSCADILAIASQVASVLVCPKS* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01276 143 Gene3D - 29 143 - -
Rops11g01276 143 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Rops11g01276 143 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01276 143 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01276 143 PANTHER PEROXIDASE 72-RELATED 26 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01276 143 Pfam Peroxidase 52 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01276 143 ProSiteProfiles Plant heme peroxidase family profile. 28 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g01276 143 SUPERFAMILY Heme-dependent peroxidases 28 138 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops11g01276 143 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01276 143 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01276 143 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g01276 143 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01276 Rops-Chr11 18674706 18676375 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01276 10 138 Peroxidase AT2G38390 52.713 1.62e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01276 K00430 - gmx:548068 221.09