Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01268 ATGGAAGGGATTGTGACTGGGGAGTCGTCATGTCATGGAGAAGTTGATGAAAACTCCTGTAAAAGTTCTAAAGACAAGCAAGAGGAAACATCAGGTCCCTTGTATATGTCTAGGAAAGAAATAATGGAAAATTCCCCGTCAAGAAAAGATGGAATTGACTGGAAGAAAGAGACGTATCTCCGGAAGTCATACTGCACATTCTTACAGGATTTAGGCATGAGACTTAATCTGCCTCAGGTAACTATAGCAACAGCCATTATCTTTTGTCATCGGTTCTTTCTTCAACAATCTCATGCAAGGAATGACCGAAGGACCATTGCGACTGCCTGTATATTTCTTGCTGGGAAGGTTAAAGAAACTCCTCGTCCGCTAAAGAATGTTATTCATATTTCTTCTGAGATCATTCACAAGAAGGATCCTGCTGCTGTACACCAGATAAAACAGGAAGTATATAAGCAACAGGAAGAGTTAATTTTACTTGGAGAGAGGGTTGTGCTTGCTACTTTAGGTTTTGATTTCGATGTTCAACTTCCCTATAAGCCCCTTATTGAAGCCATAAAGAAGTTCAATGCCTTAAAAACAGCACTTGCACGAGTTGCATGGAACTTTGTTAATGATGGGCTGATGACAACGCTCTGCTTTCAATTTAAGCCACATCACATTGCAGCAGGTGCCCTTTTCCTTGCTTCCAAGTTCTTAAAAATGAAGCTTCCTTCACATGGTGAGAAGGTTTGGTGGCAAGAGCTTGATGTCACCCCACACCAATTGGAGGAGGTTAGCAATCAAATGTTGGAACTCTATGAGCAGAATAGAGTTCCACCATCTAAAGGAAGTGAGGTAGAAGAAGGAAGTGCTAGTGCTGGAGGGGGAACAAGAACTGCTGTGAAGGGTCCTGCTGTGAATGAGGAGCGAGCCTTGAAGCAAATATCATCTCATTCAATCCCAAAGCACACACAAAAGTTTGAGGTACCACTAAAAGGAACAGAAAACCAAAGCAATGATGAGGGTGCTAAAATAGGCAGTGACATTACTTATCACAAGGTGGACTTAGAAATTAGAGATAGTCAGAACTCTGAACAGTTGCCTCAGAAAGATGACAAGGGAGAAGTGACAAATATATCTAACTCTAGGACTGACCGAATAAGAAAGGAGGATGCAGAAGTAGGAAGGAGAGATGATTCAGCGTCACACAAGTCTAGCTGTAGCTGTAATGTGGGTCGAAATTTGGAGCTTCAGGAAAGCCTACTTGGTCACTCGCCAAAAGAATCAATCAAGACGATTGACAAAGTGAAGACTTCCTTGGGAAAAAGGAGGGAGGAGGGAGGGGAAATGGCATTTAAGAAAGATGTAATGGATGAGGAAGATCTGATTGAGAGGGAGCTTGACGATGGAGTTGAATTAGCAGTTGAGGATGAAAAAAATAAGAAGAGAAGACTGAGCTGCTCTAAACCTGATGATGTAGATAATGACAAGGATCATGAAGAAACCAGAGATATGAATGCCTAG 1506 0.419 MEGIVTGESSCHGEVDENSCKSSKDKQEETSGPLYMSRKEIMENSPSRKDGIDWKKETYLRKSYCTFLQDLGMRLNLPQVTIATAIIFCHRFFLQQSHARNDRRTIATACIFLAGKVKETPRPLKNVIHISSEIIHKKDPAAVHQIKQEVYKQQEELILLGERVVLATLGFDFDVQLPYKPLIEAIKKFNALKTALARVAWNFVNDGLMTTLCFQFKPHHIAAGALFLASKFLKMKLPSHGEKVWWQELDVTPHQLEEVSNQMLELYEQNRVPPSKGSEVEEGSASAGGGTRTAVKGPAVNEERALKQISSHSIPKHTQKFEVPLKGTENQSNDEGAKIGSDITYHKVDLEIRDSQNSEQLPQKDDKGEVTNISNSRTDRIRKEDAEVGRRDDSASHKSSCSCNVGRNLELQESLLGHSPKESIKTIDKVKTSLGKRREEGGEMAFKKDVMDEEDLIERELDDGVELAVEDEKNKKRRLSCSKPDDVDNDKDHEETRDMNA* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01268 501 FunFam Cyclin-T1-5 like 175 279 - -
Rops11g01268 501 MobiDBLite consensus disorder prediction 354 397 - -
Rops11g01268 501 Pfam Cyclin, N-terminal domain 35 172 IPR006671 -
Rops11g01268 501 SUPERFAMILY Cyclin-like 35 175 IPR036915 -
Rops11g01268 501 Gene3D - 24 173 - -
Rops11g01268 501 Gene3D - 175 280 - -
Rops11g01268 501 Pfam Cyclin, C-terminal domain 195 276 IPR004367 -
Rops11g01268 501 MobiDBLite consensus disorder prediction 324 338 - -
Rops11g01268 501 MobiDBLite consensus disorder prediction 271 340 - -
Rops11g01268 501 PANTHER CYCLIN 30 330 IPR043198 GO:0006357|GO:0016538
Rops11g01268 501 MobiDBLite consensus disorder prediction 14 33 - -
Rops11g01268 501 FunFam Cyclin-T1-5 like 23 173 - -
Rops11g01268 501 CDD CYCLIN_AcCycT_rpt1 50 172 - -
Rops11g01268 501 MobiDBLite consensus disorder prediction 1 48 - -
Rops11g01268 501 MobiDBLite consensus disorder prediction 354 405 - -
Rops11g01268 501 CDD CYCLIN_AcCycT_rpt2 176 268 - -
Rops11g01268 501 SMART cyclin_7 180 265 IPR013763 -
Rops11g01268 501 SMART cyclin_7 66 167 IPR013763 -
Rops11g01268 501 MobiDBLite consensus disorder prediction 470 501 - -
Rops11g01268 501 PIRSF Cyclin_L 33 499 - -
Rops11g01268 501 SUPERFAMILY Cyclin-like 176 272 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01268 Rops-Chr11 18559895 18571021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01268 56 182 Core Cell Cycle Gene Families AT5G27620 27.559 1.64e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01268 K15188 - gmx:100780279 638.262