Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01258 ATGCTATCTTTGAATGTGGTTCCATCATCATCCTCTGTCGCTTTCAGCAAACCTAATCACCAATTTTTCATTAATGCATCTCCCAATCTCAAACCAAATCTTCTCTGCAGGTTTCAGGCTCAACAGAACCTACACTGTTTCAGAGCTACTTCTCAGCTTCATGAACCAGGTCTCAAAAGTTCCAAACTTTCTTTCATACCCACATCTCAGATCCAACATTCGATCATAAATTTAAGCTCTTTTTGCAGATTCCTTCCAAACCCTTTTGAGTTCTCAGCAAAACCCAGACACCAAATTGTTAAAGCAGCATCTGATGCTAATCCCGAGGGAGAGAGTGTAGCTCCCAGTAATCCCAAATCTAAGAATCTCAAACTTGCTCTAGTATTTGGGTTATGGTACTTCCAAAACATTGTCTTCAATATTTTCAACAAGAAAGCTTTAAATATATTCCCATTCCCATGGCTTCTTGCCTCTTTTCAGCTCTTTGTTGGGTCCATTTGGATGCTGGTGCTTTGGTCCTTAAAGCTCCAACCTTGTCCAAAAATCTCAAAACCTTTCATCATTGCTCTCCTTGGACCTGCTTTGTTTCACACCATAGGCCACATATCAGCTTGTGTTTCATTCTCTAAGGTTGCTGTTTCCTTCACCCATGTCATCAAATCTGCAGAACCAGTTTTCTCTGTCATATTTTCTTCTGTACTTGGTGATAAATATCCCATACAGGTTTGGCTCTCAATTCTACCTATTGTCCTTGGTTGTTCTTTAGCTGCTGTCACTGAGGTGTCTTTCAATATACAAGGATTGTGGGGTGCCCTCATTAGCAATGTTGGTTTTGTATTGAGGAACATCTATTCTAAAAGAAGTTTACAAAATTTCAAGGAAGTTGGTGGATTGAACTTATATGGCTGGATTACTATAATTTCATTGCTCTACCTGTTTCCAGTAGCTGTTTTTGTAAAAGGATCTCAGTGGATCCCAGGGTATTACAAAGCAATTGAAGCTATAGGCAAACCATCCACATTTTATATATGGGTGTTGCTGTCTGGGGTGTTCTACCATCTTTATAACCAATCATCTTACCAAGCCTTGGATGAAATTAGTCCATTAACTTTCTCTGTGGGAAATACAATGAAGAGAGTGGTGGTGATTGTATCTACGGTTTTGGTGTTCAGAAATCCGGTTAGACCTCTTAATGGCCTTGGATCTGCCATTGCAATTCTTGGGACTTTCCTTTATTCACAGGCAACATCTGCAAAGAAAGCAAAGAAAATTGAAGGTGAAAAGAGTAGTTAG 1293 0.3952 MLSLNVVPSSSSVAFSKPNHQFFINASPNLKPNLLCRFQAQQNLHCFRATSQLHEPGLKSSKLSFIPTSQIQHSIINLSSFCRFLPNPFEFSAKPRHQIVKAASDANPEGESVAPSNPKSKNLKLALVFGLWYFQNIVFNIFNKKALNIFPFPWLLASFQLFVGSIWMLVLWSLKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSVLGDKYPIQVWLSILPIVLGCSLAAVTEVSFNIQGLWGALISNVGFVLRNIYSKRSLQNFKEVGGLNLYGWITIISLLYLFPVAVFVKGSQWIPGYYKAIEAIGKPSTFYIWVLLSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSTVLVFRNPVRPLNGLGSAIAILGTFLYSQATSAKKAKKIEGEKSS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01258 430 PANTHER SOLUTE CARRIER FAMILY 35 124 419 - -
Rops11g01258 430 SUPERFAMILY Multidrug resistance efflux transporter EmrE 303 414 - -
Rops11g01258 430 Pfam Triose-phosphate Transporter family 123 413 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01258 Rops-Chr11 18440743 18442282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01258 24 428 Antiporters AT5G17630 70.120 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01258 K15283 - gmx:100101869 733.406