Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01235 ATGGCTAACCAGAAAACAGAGGAGGTTGTGTGCGTCACTGGAGCCAACGGTTTCATCGGTTCGTGGTTGGTTCGAACCCTATTGGAGAAAGAGAACCCACGCTACACCATCCACGCCACCATCTTCCCCGGTTCCGACCCCTCCCACCTCTTCACCGTCCACCCCGAAGCCAATTCCCGCGTCACCGTCTTCCCCGCTGACATCCTCGACGCCGCCGCAATCTCCCGCGCCGTCGAACGTTGCTCCGGCGTTTTCCACGTGGCATCCCCCTGCACCCTCGACGATCCCGTAGACCCTCACAAGGAGATTCTAGAACCCGCCGTACAAGGCACACTAAACGTTCTAGAAGCTTCCAAGAGCTTCAACGTGAGGCGCGTGGTCCTCACCTCTTCAATCTCGGCGTTGGTTCCAAACCCTAACTGGCCGGAAAACAAGCCCGTCGACGAGTCATCGTGGACGGATTTGGAATACTGTAGAAATCGATCGAAGTGGTATCCGGTGTCGAAGGCGGAGGCGGAGAAGGCGGCGTGGGAGTTCAAGGCGAAACACGGTGTCGACGTGGTGGCGATTCACCCTGCCACGTGTCTTGGGCCGTTGCTTCAACCTTCGTTGAATGCTAGCGCCGCCGTGTTACAGCGGCTGATGATGGGGTCGAGGGATACACAGGAGTATCATTGGTTGGGTGCGGTGCATGTTAAGGATGTTGCAAAAGCTCATGTCTTGCTTTATGAGACTCCCACTGCTGCTGGTAGATATCTCTGTACCAATGGTATCTACCAGTTTTCTAGTTTTGCAAACACTGTCTCAGAGTTGTACCCTGATTTCCCTGTTCACAGGTTCCCAGAGGAAACTCAACCTGGTCTGACACCATGTAAAGATGCAGCAAAGAGGTTAATAGATTTGGGACTAGTCTTCACACCAGTTCCAGATGCTGTGAGAGAAGCAGTGGAGAGTCTTATAGCTAAAGGCTTCCTGCAGCCACCACCCTCACGGGAACTTTAG 1002 0.5419 MANQKTEEVVCVTGANGFIGSWLVRTLLEKENPRYTIHATIFPGSDPSHLFTVHPEANSRVTVFPADILDAAAISRAVERCSGVFHVASPCTLDDPVDPHKEILEPAVQGTLNVLEASKSFNVRRVVLTSSISALVPNPNWPENKPVDESSWTDLEYCRNRSKWYPVSKAEAEKAAWEFKAKHGVDVVAIHPATCLGPLLQPSLNASAAVLQRLMMGSRDTQEYHWLGAVHVKDVAKAHVLLYETPTAAGRYLCTNGIYQFSSFANTVSELYPDFPVHRFPEETQPGLTPCKDAAKRLIDLGLVFTPVPDAVREAVESLIAKGFLQPPPSREL* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01235 333 Pfam NAD dependent epimerase/dehydratase family 10 248 IPR001509 -
Rops11g01235 333 Gene3D - 1 332 - -
Rops11g01235 333 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 315 - -
Rops11g01235 333 CDD FR_SDR_e 10 303 - -
Rops11g01235 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 318 IPR036291 -
Rops11g01235 333 FunFam Cinnamoyl-CoA reductase 1 3 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01235 Rops-Chr11 18181298 18182668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01235 7 325 Monolignol Biosynthesis Gene Families AT2G02400 69.906 3.96e-174 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01235 - - gmx:100795399 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01235 11 18181298 18182668 Rops11g01235 11 18181298 18182668 ECH