Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01232 ATGGGTGAAAGAATTGTAGCATTCCTGTTACTCATTTTCAGTTATTTGTTGATTGTGGCAGCAAAAACTGCAATTGAGGATTACACTGCTCTGCTGGCTCTAAAGTTAGAGTGGCAGAACACACCCCCTGATTGGGTGAGCTCAGATCCTTGTGAGAATTGGGACGGCATTAAGTGCATCAATTCACGCATTACCAGCATATCATTAGCAAGCATGGATTTGTCTGGTCAGCTTTCTTCAGATATTGGATCACTATCTGAATTGCAGATTTTGGATCTGTCTTACAATAAGAATTTGACAGGACCGCTTCCCAGGGAAATTGGAAACTTGAAAAAGTTGACATACTTACTTCTTATTGATTGTGGTTTCACCGGTCAAATCCCAGATTCAATAGGAAATCTAGAACGGCTTGTCTTCCTATCTTTAAATTCTAATAGCTTCAATGGGCGAATTCCACCTGCTATTGGTAATCTCTCAAAGGTTTACTGGATAGACATAGCTGAAAACCAGCTTGAGGGGCCCATCCCTATCTCTAATGGAACTACTCCTGGTCTTGATATGCTGCACAATACAAAGCACTTTCATTTTGGGATGAATAAGCTTTCAGGCAATATTCCTGAGGAACTCTTTAGCTCTGAAATGGCTCTGATACATGTACTTTTTGAAAGTAATCGACTTACTGGCAACATTCCATCTACACTTGGACTTGTCCAGTCTCTGGAGGTCGTGCGCTTTGATGGTAATTTAATAAATGGACGTTTACCTCTGAACCTCAACAATCTCACACATGTTCAAGAGTTGTTCCTGTCCAACAATCGCCTAACTGGTCCCCTGCCAATCCTTACCGGAATGAATACCCTCAACTACCTGGATATGAGCAATAATAGTTTTGATCCATCAGAATTTCCACCTTGGTTATCAACTCTACAGTCTCTAACAACAATAATGATGGAGAAGACACAACTTCAAGGACCTATTCCTGTTTCTTTGTTCAGACTGGTACAGTTACAGACAGTGGTGCTGAAAGACAACCAGCTGAATGGCACTTTAGATATTGGCACAGCCATTAGTAACCAACTGGGACTCCTTGATTTGCAGACCAATTTCATTGTAGATTTTAATCCACAAATTGATGTCTCTAAAGTGGAGATAATACTTGTGAGTAACCCAGTTTGCCAAGAAACAGGAGTTGTACAGTCTTATTGCTCCATTCAAAAATCCAATGACTCATATACAACACCAAATAACTGTGAGCCAGTTGCCTGCAGCTCAGATCAGACATTAAGCCCCAACTGCAAATGTGCATACCCATATACAGGAACTTTAACTCTCAGAGCTCCTTCCTTCTCAGACTTGAGTAACAAGTCTGTCTTTGTAGACCTGGAGTCATCTCTGATGCGGTCTTTTCTACTTAATCATCAACCTGTGGACTCAGTTTCTGTAAGCAATCCAAGGAAGAATAGAGTTAACTACCTTGATTTGACTCTAAAAATATTTCCATCAGGCCAAGATCGTTTCGATAGAACTGGGATTTCTGGTATAGGATTTCTGCTAAGCAACCAGACGTATAAGCCTCCTAAAATGTTTGGACCATATTATTTTATTGCTGATGTGTATGAAAACTATGTGGATGATTCAGTGTTAGAAGGTCCTGTGAAGTCCAGTAAATCTTCAAACGTTGGCATCATAGCTGGAGCTGCTGTTGGTGGTTCAGTCCTGCTGGTGTTATTACTCTTTGCAAGTGTTTATGCTTTCCGCCAAAAGAAAATGGCAAGAAAAGCAACTAAGAAAAGCAATCTTTATGAACAATGGGATCCAGATGAGAGCAATAGCATCCCACAGTTAAAAGGAGCAAGACGCTTCACTTTCGAAGAGATACAGACCTACACCAAAAACTTTTCACAAGTCAATAATATAGGATCTGGGGGTTATGGGAAGGTGTATCGGGGAACTCTCCCCAACGGGCAACTAATTGCAGTAAAACGAGCTCAAAAGGAATCTATCCAGGGAGGGTTGGAGTTTAAAACTGAGATTGAACTTCTATCGAGGGTCCACCATAAAAATCTTGTTAGCCTTCTTGGTTTCTGCTTTGAGCAAGGAGAACAACTGCTGGTTTATGAATACATTGTAAATGGTACTTTGAAGGATGCTCTTTCAGGGAAGTCAGGAATAAGATTGGACTGGATTAGAAGGCTAAAAATAGCCCTTGGTGCTGCCAGGGGGATGGATTATCTCCATGAACTTGCCAATCCTCCTATCATACACAGGGACATCAAATCCACTAATATTTTACTGGATGAGCGCTTGAATGCTAAAGTAGCTGATTTTGGTCTCTCCAAGCCTTTGGGTGATGGTGAAAAAGGTTATATTACCACTCAAGTCAAAGGAACAATGGGCTACTTGGACCCAGAGTATTACATGACTCAACAGTTGACTGAGAAGAGTGATGTTTATAGCTTTGGAGTGCTAATGTTGGAGCTGATAACTGCAAGAAGGCCAATAGAACGAGGGAAATATATTGTGAAAGTGATTAAGGAAGCTATTGACAAATCTAAAGACTTGTATGGTCTTCAGGAAATGCTTGATCCAACCATTGATGTGGAGACAACACTACATGGTTTTGAGAAGTTTGTGGAACTTGCAATGCAATGTGTTGAAGAGACAAGTTCTAACAGGCCTTCAATGAATTATGCGGTGAAAGAAATTGAAAACATGTTGCAATTGGCTGGTTCAAACCCCAATGCTGAATCAGCATCCACTTCATCTAGTTATAATGTAAGTAAGAGTTCCAAGCATCCTTATGACAATGAGTACTTTAATTCAAGTGTGATACTTCCACGTACATAA 2847 0.405 MGERIVAFLLLIFSYLLIVAAKTAIEDYTALLALKLEWQNTPPDWVSSDPCENWDGIKCINSRITSISLASMDLSGQLSSDIGSLSELQILDLSYNKNLTGPLPREIGNLKKLTYLLLIDCGFTGQIPDSIGNLERLVFLSLNSNSFNGRIPPAIGNLSKVYWIDIAENQLEGPIPISNGTTPGLDMLHNTKHFHFGMNKLSGNIPEELFSSEMALIHVLFESNRLTGNIPSTLGLVQSLEVVRFDGNLINGRLPLNLNNLTHVQELFLSNNRLTGPLPILTGMNTLNYLDMSNNSFDPSEFPPWLSTLQSLTTIMMEKTQLQGPIPVSLFRLVQLQTVVLKDNQLNGTLDIGTAISNQLGLLDLQTNFIVDFNPQIDVSKVEIILVSNPVCQETGVVQSYCSIQKSNDSYTTPNNCEPVACSSDQTLSPNCKCAYPYTGTLTLRAPSFSDLSNKSVFVDLESSLMRSFLLNHQPVDSVSVSNPRKNRVNYLDLTLKIFPSGQDRFDRTGISGIGFLLSNQTYKPPKMFGPYYFIADVYENYVDDSVLEGPVKSSKSSNVGIIAGAAVGGSVLLVLLLFASVYAFRQKKMARKATKKSNLYEQWDPDESNSIPQLKGARRFTFEEIQTYTKNFSQVNNIGSGGYGKVYRGTLPNGQLIAVKRAQKESIQGGLEFKTEIELLSRVHHKNLVSLLGFCFEQGEQLLVYEYIVNGTLKDALSGKSGIRLDWIRRLKIALGAARGMDYLHELANPPIIHRDIKSTNILLDERLNAKVADFGLSKPLGDGEKGYITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELITARRPIERGKYIVKVIKEAIDKSKDLYGLQEMLDPTIDVETTLHGFEKFVELAMQCVEETSSNRPSMNYAVKEIENMLQLAGSNPNAESASTSSSYNVSKSSKHPYDNEYFNSSVILPRT* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01232 948 ProSitePatterns Protein kinases ATP-binding region signature. 639 661 IPR017441 GO:0005524
Rops11g01232 948 ProSiteProfiles Protein kinase domain profile. 633 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01232 948 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 709 918 - -
Rops11g01232 948 CDD STKc_IRAK 639 905 - -
Rops11g01232 948 MobiDBLite consensus disorder prediction 911 930 - -
Rops11g01232 948 SUPERFAMILY L domain-like 58 423 - -
Rops11g01232 948 Gene3D Phosphorylase Kinase; domain 1 604 708 - -
Rops11g01232 948 FunFam Leucine-rich repeat family protein 26 180 - -
Rops11g01232 948 PANTHER RECEPTOR-LIKE PROTEIN 55 40 905 - -
Rops11g01232 948 Pfam Leucine rich repeat N-terminal domain 26 59 IPR013210 -
Rops11g01232 948 FunFam Leucine-rich repeat protein kinase family protein 181 280 - -
Rops11g01232 948 Gene3D Ribonuclease Inhibitor 22 179 IPR032675 -
Rops11g01232 948 Gene3D Ribonuclease Inhibitor 180 280 IPR032675 -
Rops11g01232 948 Gene3D Transferase(Phosphotransferase) domain 1 709 929 - -
Rops11g01232 948 SMART serkin_6 633 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01232 948 Pfam Protein kinase domain 634 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01232 948 ProSitePatterns Serine/Threonine protein kinases active-site signature. 753 765 IPR008271 GO:0004672|GO:0006468
Rops11g01232 948 SUPERFAMILY Protein kinase-like (PK-like) 619 932 IPR011009 -
Rops11g01232 948 FunFam Leucine-rich repeat protein kinase family protein 596 708 - -
Rops11g01232 948 Gene3D Ribonuclease Inhibitor 281 406 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01232 Rops-Chr11 18128257 18134365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01232 1 948 Receptor kinase-like Gene Family AT5G49760 58.412 0.0 1024
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Rops11g01232 Pkinase 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01232 - - gmx:100782366 1456.04