Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01223 ATGGGGTCGGAGAATGAAATTTCTCCGGCCGATGGTCATCATAGCGCTCCCGGCAAGGAACAACAAGCCGCTGGCGTTGGAATCCTCCTTCAGATCATGATGTTGGTCTTGTCCTTCGTTCTCGGCCACGTTCTCCGTCGCAAGAAGATTTACATCATCCCTGAAGCTAGTGCTTCTCTTCTCATAGGGTTAATTGTTGGTATACTAGCTAACATTTCAGACACTGAAAATAGTATCAGGGCATGGTTCAATTTTCATGAGGAATTTTTCTTCTTGTTCCTTCTCTTACCTAAACCCTTTTTCTCTAATTTTGGAGCAATTGTGACATTTGCTATATTTGGTACCTTTCTAGCTTCAGTTGTAACGGGTGTCTTGGTTTATCTTGGTGGGTTGCTCTTCCTCATGTACAGACTGCCTTTTGTTGAGTGTCTGATGTTTGGTGCTCTTATATCAGCGACTGATCCTATTACCGTTTTGTCCATATTTCAGGAGTTGGGCACAGATGTCAATCTACATGCTTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCAATTTCTTTGTACAGGACAATGTCATTGGTTAAAACTCATCCATCTGGACAAAATTTATTTATGGTGGTGGTGAGATTTGTGGAGACTTTTTTTGGGTCAATGTCTGCAGGTGTTGGAGTTGGGTTTATATCTGCTTTGCTATTTAAGTATGCAGGGTTGGATATAGACAACCTTCAGAACTTGGAGAGCTGTCTTTTCGTTCTTTTCCCATATTTCTCGTACATGCTCGCTGAAGGCCTTGGTCTGTCTGGTATTGTGTCAATACTGTTCACAGGAATAGTCATGAAGCATTATTCACATTCAAATTTGTCACAAAGTTCTCAAAGATTTGTCTCTGCTTTCTTCGAGTTGATCTCATCATTAGCAGAAACTTTTGTCTTTATATACATGGGCTTTGATATTGCTATGGAGCAACATAGCTGGTCTCATGTTGGATTTATATTCTTCTCCATTATATTTATCGGAATTGCAAGAGCGGCAAATGTCTTCTCTTGTGCTTATCTGGTCAATCTGGTCAGACCTTCTCATCGAAAGATACCACTAAAACACCAGAAAGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCCTTTGCCCTTGCTCTGCAATCAGTTCATGATCTGCCAGAAGGACATGGACAGACCATCTTCACTGCAACTACCGCAATAGTTGTTTTGACGGTATTGCTGATTGGTGGTTCAACAGGTACCATGCTGGAAGCTCTAGATGTTGTAGGTGGCGACAGTATTAATGATAGTCCTTTGGCTTCAATTGGTACAATAACAAATCACGAGGAGAACAATGGTTATATTGCTCCTTCTTACAGTGAAGAATCATCATCATCTGGGAACAAAATCAAGATGAAGCTAAAAGAGTTCCATAAGAGTGCTATATCTTTTACGGCATTAGATAGAAACTACCTCACCCCATTCTTTACAAGTCAAAATGGAGATGAAGATGATGAAGCCGAGCCTTTTACTTCTACGAGATCTGGATTTCACGGCCTGAACCATTATTCATCATGA 1584 0.4097 MGSENEISPADGHHSAPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYIIPEASASLLIGLIVGILANISDTENSIRAWFNFHEEFFFLFLLLPKPFFSNFGAIVTFAIFGTFLASVVTGVLVYLGGLLFLMYRLPFVECLMFGALISATDPITVLSIFQELGTDVNLHALVFGESVLNDAMAISLYRTMSLVKTHPSGQNLFMVVVRFVETFFGSMSAGVGVGFISALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYSHSNLSQSSQRFVSAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLVRPSHRKIPLKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALDVVGGDSINDSPLASIGTITNHEENNGYIAPSYSEESSSSGNKIKMKLKEFHKSAISFTALDRNYLTPFFTSQNGDEDDEAEPFTSTRSGFHGLNHYSS* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01223 527 PRINTS Na+/H+ exchanger signature 92 106 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops11g01223 527 PRINTS Na+/H+ exchanger signature 147 157 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops11g01223 527 PRINTS Na+/H+ exchanger signature 107 115 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops11g01223 527 Pfam Sodium/hydrogen exchanger family 34 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Rops11g01223 527 NCBIfam sodium/hydrogen exchanger 3 32 436 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops11g01223 527 MobiDBLite consensus disorder prediction 499 527 - -
Rops11g01223 527 Gene3D - 140 191 - -
Rops11g01223 527 PANTHER SODIUM/HYDROGEN EXCHANGER 13 512 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01223 Rops-Chr11 18029101 18037812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01223 21 428 Antiporters AT3G05030 33.107 1.44e-45 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01223 K14724 - gmx:100790830 867.455