Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01210 ATGTATCCAAGGCTGATACACCCTCATGAAGGGATAATTGGACAAGAAGATATGCAGGGTGGTGGTGTCTCTAACCATAAGGGAGACCCTTGTCTTGTTTTGACGGCTGATCCAAAACCTCGTCTTCGTTGGACTCAAGACCTTCATGAACGATTTATTGATGCTGTTACACAGCTTGGGGGTGCAAGTAAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTATTTCATTTAAAGAGTCATCTTCAGAAATACCGACTTGGTAAGCAATCAGGGAAAGATATGGGTGAGGGATGCAAAGATGGAATATCAGGTTCATATCTCTTGGAAAGCCCTGGTACTGATAACTCTTCCCCAAAGTTGCCAACTTCTGATACAAACGAGGGTTATGAAATCAAGGAAGCATTAAGAGCACAGATGGAAGTGCAAAGTAAACTACACTTGCAAGTGGAGGCAGAGAAGCACTTGCAGATTCGCCAGGATGCAGAGCGAAGATACATGGCCATGCTAGAAAGAGCTTGCAAAATGCTGGCTGATCAATTCATTGGTGCCACAGTTATAGACACAGACAGCCAAAAGTTTCAAGGAATTGGAAGTAAAGCACCAAGAGGTTCCTTGGTTGATCCTCTTGGTTTTTACTCCTTGCCATCTGCTGAGGTGGCTGGAGTGAATAATGTCCCAGAAGAGGAAATACCACCTAGTCTCCCACCCCAAAGGGCTGATTGTTCAACTGAAAGTTGTTTAACCTCACATGAGAGTTCTGGAGGATTGACTTTAGAAGGTTCTCCAGGTGGGGGTAAAAGGAGGATGCTTGGCATGGACTCAATGGCAGCACCTTTGATTTGGAGTGAAGCTAAGATGAAAACTCAAGCCATCAATGTAGTCCGTGGTAATAATCCTCATGAGATAACTAGGTATGGCATGTAG 945 0.4434 MYPRLIHPHEGIIGQEDMQGGGVSNHKGDPCLVLTADPKPRLRWTQDLHERFIDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEGCKDGISGSYLLESPGTDNSSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYMAMLERACKMLADQFIGATVIDTDSQKFQGIGSKAPRGSLVDPLGFYSLPSAEVAGVNNVPEEEIPPSLPPQRADCSTESCLTSHESSGGLTLEGSPGGGKRRMLGMDSMAAPLIWSEAKMKTQAINVVRGNNPHEITRYGM* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01210 314 MobiDBLite consensus disorder prediction 245 263 - -
Rops11g01210 314 Gene3D - 38 96 - -
Rops11g01210 314 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 14 264 IPR044848 GO:0003700
Rops11g01210 314 FunFam Myb family transcription factor 38 96 - -
Rops11g01210 314 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
Rops11g01210 314 MobiDBLite consensus disorder prediction 110 131 - -
Rops11g01210 314 MobiDBLite consensus disorder prediction 236 276 - -
Rops11g01210 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Rops11g01210 314 Pfam MYB-CC type transfactor, LHEQLE motif 137 182 IPR025756 -
Rops11g01210 314 NCBIfam myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Rops11g01210 314 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Rops11g01210 314 MobiDBLite consensus disorder prediction 115 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01210 Rops-Chr11 17922594 17929147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01210 24 256 G2-like Transcription Factor Family AT3G24120 45.679 4.52e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Rops11g01210 Myb_DNA-binding 3.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01210 - - gmx:100782369 561.222