Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01198 ATGAGGCCTCAAAAGCATTCAATTTTCTTCTTATCATCACTCATTCTTCTTTATCTGTTTCAAACACCGGCTTTTGCTACAAAAAAGTCATACATTGTGTACCTGGGATCACATGAGCATGGTCCAGGAGTTACAGAAGCTGATTTTGATCGAGTTACACAAAGTCATCATGAATTACTTGGATCCTATTTGGGAAGTGCTGAGAAAGCAAAAGAAGCAATGTTTTATTCATACACAAAGCACATCAATGGCTTTGCAGCTATCCTTGAAGAGGAAGAAGCTGCTAACCTTGCAAATCATCCAGACGTTGTTTCAGTATTCTTAAACCAAGGAAGAAAACTACAAACTACATATTCGTGGGAATTCATGTCTCAGGAATATAATGGTGCAACTCGTCCCTTTTCCCTGTTTGAAAAGGCCAGATATGGTGAAGATACTATTATAGGAAGTCTTGATACTGGTGTATGGCCAGAACATCCTAGCTTTAGTGATGAGGGGATGGGACCCATTCCTTCAAGGTGGAAAGGAACTTGTCAGAGTGGTTCCACTGGCTTCCCTTGTAACAGGAAGCTAATTGGAGCAAGGTACTTCAACAAAGGGTATGCTTCCTGGGTTACTCCAGAGCATATGGAAAATAGTACATTGAACACAGCAAGAGACTATGTGGGACATGGTTCTCACACACTATCAACATTAGGAGGGAACTTTGTTCATGGTGCAAATGTGTTTGGCTTAGGCAATGGAACTGCCAAAGGTGGTTCTCCTAAAGCCAGGCTTGCTACTTACAAAGTATGCTGGCCACCAGTTGCAGACATTGAATGCTTTGAAGCTGATATCTTGGCAGCCATAGATACAGCTATAGATGATGGTGTTGATGTTCTTTCCATTTCTCTTGGAGGGTCTCCTATGGATTACTATCGTGATGTTCTTGCTATTGGAACATTTCATGCTGTTAAGAATGGTATCACTGTAGTATGTGCTGCTGGAAATTCTGGACCACAACCTGGAAGTGTATCAAATTCTGCACCTTGGATACTTACAGTTGGTGCAAGTACCTTGGACAGAAAGTTTGAAGCTGTTGTTGAACTCCCCAATGGACAACGCTTTGAGGGATATACTCTTTCTAATGGTGTCCCAGAAGACAAACTTTATCCACTCATTAGTGCTACACAGGCAACAGCGGCTGATTCACATGAATATGAGTCCGTGTTCTGTAAGGAAGGAACAATTGACCCAGAGAAGGTAAAGGGCAAAATAGTGCTTTGTCTTAGAGGTAACAATGAAAGAGTTGAAAAGAGCCTTGTTGCTTTAGAAGCTGGTGCTGCTGGGATGATTCTTTACAATGATGAGTATACTCCGGAGGACTATAAGGTCGTGTCTGATCCTCATTTCCTTCCAACATCAGAAATTAGCTATCAAGATGGTCTTGCAATTTTAGCCTACATCAATTCTACTGAGAACCCGATGGTATACATGCATCCACCCACAACTGAGTTGAAGATAAAGCCTTCTCCATCCATTGCACCTTTCTCATCAAGAGGGCCAAACATGATCTCACCAGAGATCCTCAAGACTCTGATAAGAAGCTTCTCTGGTGTTCCTTACCAATGTCCTCATGTGGTCAAAATCCTGGACTTCAACTACCCTGCAATAATAATACCAAGACTCTATGGTTCAGTTACTTTGTCCAGGAGGGTTAAAAATGTTGGTAAACCAGGTACTTATGCAGCAAGCCTCCATGCACCCCAAGGTGTTTCCATAACTGTGGAGCCTAATACCTTGAAATTTGACAAGATTGATGAAGAGAAAAGCTTTAACATGACATTTGAGGTTACAAGACCAGGTGTTGATACAGTTTATGGGAAGCTAACTTGGACAGATGGCAAGCATTATGTGTGGAGTCCAATTATAGTTGGTGGCATTATGGCTTAG 1932 0.4177 MRPQKHSIFFLSSLILLYLFQTPAFATKKSYIVYLGSHEHGPGVTEADFDRVTQSHHELLGSYLGSAEKAKEAMFYSYTKHINGFAAILEEEEAANLANHPDVVSVFLNQGRKLQTTYSWEFMSQEYNGATRPFSLFEKARYGEDTIIGSLDTGVWPEHPSFSDEGMGPIPSRWKGTCQSGSTGFPCNRKLIGARYFNKGYASWVTPEHMENSTLNTARDYVGHGSHTLSTLGGNFVHGANVFGLGNGTAKGGSPKARLATYKVCWPPVADIECFEADILAAIDTAIDDGVDVLSISLGGSPMDYYRDVLAIGTFHAVKNGITVVCAAGNSGPQPGSVSNSAPWILTVGASTLDRKFEAVVELPNGQRFEGYTLSNGVPEDKLYPLISATQATAADSHEYESVFCKEGTIDPEKVKGKIVLCLRGNNERVEKSLVALEAGAAGMILYNDEYTPEDYKVVSDPHFLPTSEISYQDGLAILAYINSTENPMVYMHPPTTELKIKPSPSIAPFSSRGPNMISPEILKTLIRSFSGVPYQCPHVVKILDFNYPAIIIPRLYGSVTLSRRVKNVGKPGTYAASLHAPQGVSITVEPNTLKFDKIDEEKSFNMTFEVTRPGVDTVYGKLTWTDGKHYVWSPIIVGGIMA* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01198 643 CDD Peptidases_S8_3 113 353 IPR034197 -
Rops11g01198 643 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 115 IPR037045 -
Rops11g01198 643 FunFam subtilisin-like protease SBT1.5 354 499 - -
Rops11g01198 643 ProSiteProfiles Serine proteases, subtilase domain profile. 119 643 - -
Rops11g01198 643 Gene3D - 526 640 - -
Rops11g01198 643 CDD PA_subtilisin_like 360 490 - -
Rops11g01198 643 Pfam Fibronectin type-III domain 545 638 IPR041469 -
Rops11g01198 643 Pfam Peptidase inhibitor I9 30 114 IPR010259 -
Rops11g01198 643 Pfam Subtilase family 143 522 IPR000209 GO:0006508|GO:0008236
Rops11g01198 643 SUPERFAMILY PA domain 389 490 IPR046450 -
Rops11g01198 643 Gene3D Peptidase S8/S53 domain 145 525 IPR036852 GO:0004252|GO:0006508
Rops11g01198 643 FunFam Subtilisin-like protease SBT5.3 20 115 - -
Rops11g01198 643 Pfam PA domain 404 478 IPR003137 -
Rops11g01198 643 Gene3D - 354 499 - -
Rops11g01198 643 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 525 IPR045051 -
Rops11g01198 643 SUPERFAMILY Subtilisin-like 114 517 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01198 Rops-Chr11 17642851 17646874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01198 525 638 Subtilisin-like Serine Gene Family AT5G59810 48.305 1.18e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01198 - - gmx:100808488 713.375