Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01183 ATGGACTCTAAAAGTAGTGCTAGAGCTCTCCCAAAACATAGTCAAAAGACGGCTGGGATTCAAACCCTTGAGGCAAAAGACACCAAGCCTTCTTCAGTGCCGGTTCTGAAGACTGGCAAACCTCAGCTGGCTGCTCTTGAAGATTTGTCTAAGTCTGTACAAAACAAATCAAAGCAGAATACTGGTGAAATTTCTGAAAGCAAGAAGTTGGGGGTTTCAATCCAAAAGGGATCTGCTGATTCTTTGAGTAACAAATGTGGTTCTGGTGCTTCCTCATCCGTTCCAGACAAAGCATCTGGAGAAGTGGAGCATGCTGTTAATGAGAGCAAAGTCTCACAGGAAAGCTCTATTGATCAAGAGAAAAAGACATCAGAATATGGAAGTGTGAAGAACAGTTCTGTTTCCGCCAAAGCTAGTGATGGAGCTAGCAGTCTTGCAAAGACGAGTGGAAGTGCCAAGATCAGTGATCGAGCTGATTTTGTTGAGAGTGGTAAGAGCAGTATTTGCAGGGGAAGTACAAGCAGTGATGTGAGTGATGAGAGTACTTGTAGTAGCTTTAGTAGCAGCATAAACAAGCCCCACAAGGCAAATGACTTGAGATGGGAAGCTATCCAAGTGGTTCGAACTAGAGATGGGGCATTGGGTTTAGGTCACTTTAGACTACTGAAGAGGTTGGGTTGTGGGGATATTGGCAGTGTATACCTCTCTGAGTTGAGTGGAACTAAATGTTACTTTGCAATGAAGGTAATGGACAAAGGGTCCCTAGCAAGTCGTAAAAAGCTACTTCGTGCGCAGACAGAACGAGAAATTCTGCAGTCACTGGATCACCCCTTTCTCCCAACATTGTACACCCATTTTGAGACAGAGAAATTCTCATGCTTGGTAATGGAATTCTGCCCAGGTGGAGACCTCCACACTCTTAGGCAGAAACAACCAGGGAAGCATTTTGCTGAGCAGGCAGTAAAGTATGTTTAA 975 0.4441 MDSKSSARALPKHSQKTAGIQTLEAKDTKPSSVPVLKTGKPQLAALEDLSKSVQNKSKQNTGEISESKKLGVSIQKGSADSLSNKCGSGASSSVPDKASGEVEHAVNESKVSQESSIDQEKKTSEYGSVKNSSVSAKASDGASSLAKTSGSAKISDRADFVESGKSSICRGSTSSDVSDESTCSSFSSSINKPHKANDLRWEAIQVVRTRDGALGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFAEQAVKYV* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01183 324 MobiDBLite consensus disorder prediction 1 148 - -
Rops11g01183 324 PANTHER FLIPPASE KINASE 1-RELATED 54 323 - -
Rops11g01183 324 MobiDBLite consensus disorder prediction 101 125 - -
Rops11g01183 324 Gene3D Phosphorylase Kinase; domain 1 213 324 - -
Rops11g01183 324 MobiDBLite consensus disorder prediction 165 193 - -
Rops11g01183 324 FunFam Serine/threonine-protein kinase D6PK-like 217 302 - -
Rops11g01183 324 MobiDBLite consensus disorder prediction 126 148 - -
Rops11g01183 324 MobiDBLite consensus disorder prediction 48 95 - -
Rops11g01183 324 Pfam Protein kinase domain 220 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01183 324 MobiDBLite consensus disorder prediction 166 193 - -
Rops11g01183 324 SMART serkin_6 219 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01183 324 ProSiteProfiles Protein kinase domain profile. 219 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01183 324 MobiDBLite consensus disorder prediction 10 28 - -
Rops11g01183 324 SUPERFAMILY Protein kinase-like (PK-like) 193 322 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01183 Rops-Chr11 17348114 17349088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01183 49 323 AGC Kinase Gene Family AT5G47750 73.091 2.07e-124 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops11g01183 Pkinase 4.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01183 K08286 - gmx:100781600 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01183 11 17348114 17349088 Rops11g01183 11 17348114 17349088 ECH