LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops11g01182	ATGTCAATGATGTCAGGGGAAACGGGACATGAGTGTTTGCATTATGATTCGGATGAAGAAACCTCTAATTGCGCTTGTGTTTTCATGGGATTTAGGAGAAACCAAGTGTTAGATTACAGCCAAAGCTTCAGCAATAGTAGTGAGATAGGCAAGGAAGATTCAGAGGAGCTGTTTGAGATCAATCTAAAGCTGCCATTGGATACAATATCAGAAGACTGTGAGAGCAGTGTGTTCTCTTTTGATATTCATAATGAGAAAGATATTGTTCATGTGGCAGTGGACCATGCTGGAGAATCAAGCATGGGAGCTCTTTTGTGGACTTTGAACCATGCTGTGACACCCTTTACCACTGTCCATCTCATACATGTTTTTCCTGAAATCAGGCTCATTCCAAGTCCATTTGGAAAAATTCTAAGGAGTCATGTAAATCCAGAGTATGTTAACTTACACTTGACTCAAGAAAAAGGCAAGAGGAAAATGCTCCTCCAAAGGTTCATTGACTTCTGCACTGATTCAAAGGTTAAGGTGGAGATTATGCTTATTGAAGGTGACAATATTGTCAAAGCCATTGTGGACCTTGTTAGGAATCTTGGTATAAGGAAATTGGTGATTGGAACTACCAAATCTAATTTAAGCAAATCTGTCTCTAGGAGGGGAAATGCCATAGCAGACAAGGTACTCAAGAATGCACCAGAAATCTGTGATGTTAAAATAGTATGTGATGGAAAGGAAGTGATTGATCAGATGATTGGTTGCACTTCATCATACCCTAGTGAAAGTAGCAGTTCCAGACTTTCACAAGAAGAAAAAGAATCCCATGGTTTTGTTCCTCTTATGCGCTTTATGCCCAATCCTATATGGTTATTTAGACCCAGATTTTAA	882	0.3934	MSMMSGETGHECLHYDSDEETSNCACVFMGFRRNQVLDYSQSFSNSSEIGKEDSEELFEINLKLPLDTISEDCESSVFSFDIHNEKDIVHVAVDHAGESSMGALLWTLNHAVTPFTTVHLIHVFPEIRLIPSPFGKILRSHVNPEYVNLHLTQEKGKRKMLLQRFIDFCTDSKVKVEIMLIEGDNIVKAIVDLVRNLGIRKLVIGTTKSNLSKSVSRRGNAIADKVLKNAPEICDVKIVCDGKEVIDQMIGCTSSYPSESSSSRLSQEEKESHGFVPLMRFMPNPIWLFRPRF*	294

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops11g01182	293	Pfam	Universal stress protein family	89	231	IPR006016	-
	Rops11g01182	293	Gene3D	HUPs	82	239	IPR014729	-
	Rops11g01182	293	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	91	239	-	-
	Rops11g01182	293	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE	35	281	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops11g01182	Rops-Chr11	17342171	17343888	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops11g01182	89	242	U-box Gene Family	AT2G45910	31.646	6.47e-15	73.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops11g01182	-		-	gmx:100818837	453.366