Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01181 ATGTCTGCAACTTTAACTGAGACCTTGCACCCTTCAGATGAAGAAGGTGTGTCCATGGACAACAACTCCCAAATGTTCAACTATGACCATGGCAGCACCAGTGTGAGTGAGATAGAGGAAGAGAATTCAACACAGTTGTACTTAAATGATGGTCCCATGGCAACTATTAATGAAGATAACGAGGGTGAAGAAGACACTGTTTATGTAGCAGTTGAGAAGAGTGAGACTAGCATGGAAGCCTTGTTATGGACCCTTAACAACTTGGTTACTCCATCTACTATAGTCTATCTCATACACGTTTTCCCAGAGATCAAGCACATCCCAAATCCTTTGGGAGTGGGAATGGTTCCAAAGGACCAAGTGAGTACTGATCAGGTGGAGAGTTATATGGCCCAAGAAAGAGATAAGAGAAGAGAGCTCCTTAACAAGTTCATCCAATCATGCTCTACTCACAAGGTTAAGGTGGACACCATCTTGATTGAGAGTGACTTGGTTGCAAAGGCTATCATTGACCTGATTCCCATTCTTCAAATAAGAAAACTAGTAATTGGAGCCAACAAATCCCAATTAAGAAAATTAAGATCAAGGAAAGGGAATGGCTTAGTTGATCAGATACTTCACAATGCACCAGAAAGTTGCAAGGTGAGAATTGTATGTGAAGGGAAGGAAGTAAATGAACAGATAACTCGTGCCATTGCTAATGATACTTCAATGTCACAGAAAGATCAGAAAAATGATTGGGTTTCATGTGTTTGTTTTAACTTTTAA 768 0.4023 MSATLTETLHPSDEEGVSMDNNSQMFNYDHGSTSVSEIEEENSTQLYLNDGPMATINEDNEGEEDTVYVAVEKSETSMEALLWTLNNLVTPSTIVYLIHVFPEIKHIPNPLGVGMVPKDQVSTDQVESYMAQERDKRRELLNKFIQSCSTHKVKVDTILIESDLVAKAIIDLIPILQIRKLVIGANKSQLRKLRSRKGNGLVDQILHNAPESCKVRIVCEGKEVNEQITRAIANDTSMSQKDQKNDWVSCVCFNF* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01181 255 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 21 254 - -
Rops11g01181 255 MobiDBLite consensus disorder prediction 1 42 - -
Rops11g01181 255 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 66 215 - -
Rops11g01181 255 Gene3D HUPs 59 231 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01181 Rops-Chr11 17336626 17338571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01181 76 237 Plant U-box Gene Family AT5G57035 29.091 1.90e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01181 - - gmx:100781056 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04613 2 84091667 84093031 Rops11g01181 11 17336626 17338571 PCT