Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops11g01175 | ATGAGTGAACAATTGGGGCTGCTAAAAGTCATAGTTGTGAAAGGGAAAAGGTTGGTGATCCGGGATTTCAAGAGCAGTGATCCTTATGTTGTGCTCAAACTAGGGAATCAGACCGCAAAGACCAAGGTCATTAATAGCTGTTTGAATCCTGTTTGGAATGAAGAGCTGAATTTCACTCTGACAGAACCCTTGGGAGTTCTGAATTTGGAGGTATTTGATAAAGATCTTTTGAAGGCTGATGACAAGATGGGAAATGCTTTTGTTAACCTTCAACCATTAGTCTCTGCAGCTAGATTAAGAGATATTTTAAGAGTCTCTTCTGGTGAGACAACATTAAGGAAGGTAGTACCTGATAGTGAAAACTGTCTTGTTCGTGAAAGCAGTATCAATTGTGTTAATGGTGAGGTGGTGCAGAATGTTTGGTTAAAGCTTCGTGGAGTAGAATCTGGGGAGCTAGAATTGAAAATCAAGTTGATCACACCTGTTGCTACCTCAATATAG | 501 | 0.4012 | MSEQLGLLKVIVVKGKRLVIRDFKSSDPYVVLKLGNQTAKTKVINSCLNPVWNEELNFTLTEPLGVLNLEVFDKDLLKADDKMGNAFVNLQPLVSAARLRDILRVSSGETTLRKVVPDSENCLVRESSINCVNGEVVQNVWLKLRGVESGELELKIKLITPVATSI* | 167 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops11g01175 | 166 | CDD | C2_ArfGAP | 5 | 150 | - | - | |
Rops11g01175 | 166 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
Rops11g01175 | 166 | ProSiteProfiles | C2 domain profile. | 1 | 103 | IPR000008 | - | |
Rops11g01175 | 166 | Gene3D | C2 domain | 3 | 164 | IPR035892 | - | |
Rops11g01175 | 166 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 159 | IPR035892 | - | |
Rops11g01175 | 166 | Pfam | C2 domain | 7 | 99 | IPR000008 | - | |
Rops11g01175 | 166 | PRINTS | C2 domain signature | 46 | 59 | IPR000008 | - | |
Rops11g01175 | 166 | PRINTS | C2 domain signature | 22 | 34 | IPR000008 | - | |
Rops11g01175 | 166 | PRINTS | C2 domain signature | 67 | 75 | IPR000008 | - | |
Rops11g01175 | 166 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 4 | 160 | IPR044562 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops11g01175 | Rops-Chr11 | 17292860 | 17294943 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops11g01175 | 1 | 159 | C2H2 Transcription Factor Family | AT4G21160 | 45.283 | 5.70e-40 | 136 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops11g01175 | - | - | gmx:100779624 | 305.064 |