Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01175 ATGAGTGAACAATTGGGGCTGCTAAAAGTCATAGTTGTGAAAGGGAAAAGGTTGGTGATCCGGGATTTCAAGAGCAGTGATCCTTATGTTGTGCTCAAACTAGGGAATCAGACCGCAAAGACCAAGGTCATTAATAGCTGTTTGAATCCTGTTTGGAATGAAGAGCTGAATTTCACTCTGACAGAACCCTTGGGAGTTCTGAATTTGGAGGTATTTGATAAAGATCTTTTGAAGGCTGATGACAAGATGGGAAATGCTTTTGTTAACCTTCAACCATTAGTCTCTGCAGCTAGATTAAGAGATATTTTAAGAGTCTCTTCTGGTGAGACAACATTAAGGAAGGTAGTACCTGATAGTGAAAACTGTCTTGTTCGTGAAAGCAGTATCAATTGTGTTAATGGTGAGGTGGTGCAGAATGTTTGGTTAAAGCTTCGTGGAGTAGAATCTGGGGAGCTAGAATTGAAAATCAAGTTGATCACACCTGTTGCTACCTCAATATAG 501 0.4012 MSEQLGLLKVIVVKGKRLVIRDFKSSDPYVVLKLGNQTAKTKVINSCLNPVWNEELNFTLTEPLGVLNLEVFDKDLLKADDKMGNAFVNLQPLVSAARLRDILRVSSGETTLRKVVPDSENCLVRESSINCVNGEVVQNVWLKLRGVESGELELKIKLITPVATSI* 167
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01175 166 CDD C2_ArfGAP 5 150 - -
Rops11g01175 166 SMART C2_3c 7 102 IPR000008 -
Rops11g01175 166 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Rops11g01175 166 Gene3D C2 domain 3 164 IPR035892 -
Rops11g01175 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 159 IPR035892 -
Rops11g01175 166 Pfam C2 domain 7 99 IPR000008 -
Rops11g01175 166 PRINTS C2 domain signature 46 59 IPR000008 -
Rops11g01175 166 PRINTS C2 domain signature 22 34 IPR000008 -
Rops11g01175 166 PRINTS C2 domain signature 67 75 IPR000008 -
Rops11g01175 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 160 IPR044562 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops11g01175 Rops-Chr11 17292860 17294943 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01175 1 159 C2H2 Transcription Factor Family AT4G21160 45.283 5.70e-40 136
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01175 - - gmx:100779624 305.064