Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01161 ATGTATTCGAAGAAAATGGTCAGTTTCGGTGTGCCCCACCAGTGGTTCGAGTGGAGAAAATGGTTGAGACCATTCAGTCCAAACTTCCTGGAGCTCCTCGGTTTCTTCTTTGTATGCTTCCTGAGCGAAGAAAAAAACGCTGATCTTTATGGTCCATGGGAGAAGAAATGTCTTACTGAATTCGGAATAGCTACTCAGTGCATATCTCCTACAAGGGTCAATTGCCAATCCCTTACGAATATTCTGTTGAAGATCAATGCCAAGCTTGGTGGTTTGAGTTCGTTGTTAGGTGTTGGACATTCTCCTTCCATTCCTGTTGCTTCCAGGGTCCCCACCATCATTCGGGGCATGAATGTGTCTCATAGCTCACCAGGGAAATCAGATGTTCCTTCGATTAAAGTGGTCATCAGCTCTAGACAGTAG 423 0.4515 MYSKKMVSFGVPHQWFEWRKWLRPFSPNFLELLGFFFVCFLSEEKNADLYGPWEKKCLTEFGIATQCISPTRVNCQSLTNILLKINAKLGGLSSLLGVGHSPSIPVASRVPTIIRGMNVSHSSPGKSDVPSIKVVISSRQ* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01161 140 Gene3D - 33 98 - -
Rops11g01161 140 Pfam Piwi domain 36 138 IPR003165 GO:0003676
Rops11g01161 140 SUPERFAMILY Ribonuclease H-like 36 136 IPR012337 -
Rops11g01161 140 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 31 139 - -
Rops11g01161 140 ProSiteProfiles Piwi domain profile. 36 140 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01161 Rops-Chr11 17017514 17017936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01161 44 139 Eukaryotic Initiation Factors Gene Family AT1G48410 40.404 4.09e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01161 K11593 - csv:101220468 152.14