Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01095 ATGACCACACATACAAACAGAAAACCACCCCATGTTTTCTTTTTCTTCCTTCTCTTTCTATTGTTGATCATTATCAAAGCCCAAGGAAGCTGCTTCTCTGGTTGCAACCTTGCTCTAGCTTCCTATTACATATGGGAAGGCACAAATCTCACTTACATTAGCAAACTCTTTGGAAAAACAACCTCAGAGATTCTTAAATACAACCCAAGTGTCAAAAACCCTGATGTCATTCAAAGCCAAACACGGCTCAATGCGCCCTTCTCATGTGAGTGTCTCAACGGTGTTTTCTTAGGCCACACCTTCTCTTACACCACCCAACACAGTGACACCTACAAGACAATTGCTAAGGTTGATTTCTCAAACCTCACCACAAAGGAGTGGGTTAGTAGAGTGAATAGTTATCCACCAGACCAGATGCCCGACAACGTTAAAATCAATGTTACTATCAACTGCTCCTGTGGAGACAGACACGTGTCCAAGGATTATGGGTTGTTTCTGACATACCCACTTCGACAAGGTGAGGACTTGCGGGCAGTTGCGGCGGTTTCCGGCGTGCCGTCGGAGCTGCTTCAGAGGTATAACCCCGGGTCAGATTTCAGTGCCGGGAATGGACTTGTGTTTGTGCCGGCCAAAGATGAAAATGGAAACTTTCCACCACTGAAGCTGAGTGGAGCCATTGCTGGAATAGCTGTGGGAGGAGCTGTTGGGATCTTACTTTTGGCACTTATTGTATATGTTGGGCGATGTAGAAGAAAGAAAGTGGCTGAGGTATCCCTTCTTCCAATCCCAGGAGCATCTGAGGATCAGTATAGTCAACTCCAACAACATGGTTGTGGAAGCAGCTTGGACAAGACATCAGAATCTTCTGTTGTGGCTTCTCCAAGGTTGACAGGTATTACAGTGGACAAGTCGGTGGAGTTCTCATACGAGGAGCTAGCTAAAGCTACTAATGATTTTATCAAGGCTAATATAATTGGTCAAGGAGGCTTTGGATCTGTTTACTATGCCGAGCTTCGAAATGAGAAAGCTGCAATTAAAAAGATGGATATGCAAGCATCAAACGAATTCCTTGCTGAACTAAAGGTTCTGACACACGTCCATCACTTGAACTTGGTGCGGTTGATAGGATTTTGTGTTGAGGGCTCCTTATTTTTGGTTTATGAGTACATTGAGAATGGCAATTTAAGTCAACATTTGCGTGGCTCAGGGAAGGATCCGTTATCATGGCCAGCTAGAGTTCAAATTGCTCTGGATGCAGCAAGAGGACTAGAATACATCCATGAGCATACAGTTCCTGTTTACATCCATCGAGATATTAAATCAGCAAACATTTTGATAGACAAAAACTTTCGTGCAAAGGTTGCAGATTTTGGTCTGGCAAAATTGACTGAATATGGTAGTTCTTCATTACAAACACGTCTTGTGGGTACATTTGGTTATATGCCTCCAGAATATGCACAATATGGTGAAGTTTCCCCCAAAATAGATGTATATGCTTTTGGAGTTGTTCTCTATGAACTCATATCTAGCAAGGAAGCTATTGTCAAGACAAACGAGCCTGAGAACGAATCAAAAGGACTAGTTGTCTTGTTTGAAGAAGTTCTTGGTCTGTCAGACCCAAAAGAAGATCTTCATAAACTTGTTGACCCTAGACTTGGTGACAACTACCCTCTTGACTCAGTATTTAAGATGTCTCAACTTGGCAAAGCTTGTACACATGAAAACCCTCAACTTAGGCCAAGCATGAGATCAATTGTAGTTGCCTTAATGACACTTTCATCTGCAACTGAGGATTGGGATGTTGGCTCCTTCTATGAAAACCAAGCTCTAGTGCATCTAATGTCTGGAAGTTACATACATTATTTGGCTTATGATAAGGCTAGGTTTGTAGTAATAATAATGGAGTATGTATTTCAAAGACAAGGAAAGTCCAATCAACAGACTGACGATAAATTGAAGTTCATAAGGTACTCAAATTCCTTTGAAATTTCAAAGAGACAAAATCACAAATATGGTTATGAGAAACCAAAATCTGGAGGAGAAAAAGACACTCTGCCCCGTGTAAAGAAGAGTACTGCACTAGGGAGAAAAGTTTCCGTTTCGCTTGGAGAACAGTCAAATCAAGATATTGATAAGAATCCAGCCAAAATCTCAAGATGCTCAAGAGATTTTGGAATTTCAAAGAAGAGAAAGGTTCAAGAAATTCATCTACATGATATTACAAATTCAAAGTCAGTAAGGGAAGAAAACATTTTGTCAAAGAGGAAAAGACATGAGGCAAAGAAGTGTCTTACTACCTCGAACAATAAAAGAAAATTTGAAGATAATATCATGAATAGCAGTTCGGAAGATGAGGAAGTTTTTTCTCTTTCAAAAACAAAGTCCAGAAATAAAGCTAGAAAAATGGATAATATGATGGAAACTGCACAAAATTCCAGAAAATGCCATCAGTGCATGAAAAAGGATAGAGCTGCATTTGTACCTTGTACTAAGTGTCTGAAAATGTACTGTGTGGGGTGCATCAAGCAATGGTATCCCAATATGTCAATAGAAGACATAGCAGAGAGGTGCCCCTTTTGCCGTAAAAATTGCAATTGTAATGTTTGCTTGCGCTCAAGAGGAATGATTAAGACATCTAACAGGAAAATCACAGACTCTGAAAAAGTTCAGTATCTCCAATATATGATTAACTCACTTCTTCCATTCATGCAACAAATTTGTGAAGAACAAAATCAAGAGCAAGAGATTGAAGCTAAAATACAAGGAAAATCACGTTCTGAGATTGAGATACCACAAACTCCCTGTGGTGAGGATGAGCGTATCTATTGTGACCATTGTGCTGCTTCAATTATGGACCTTTATAGAAGCTGCCCAAAGTGTTCCTTTGAAATCTGCCTTAGTTGTTGCCAAGAAATACGCAATGGAAGTATTACACCCCGGTCTGAAATGAAGTTCCAATATGTGAATAGGGGTTATGATTATATGCATGGTGGTGATCCTCTACCTGTGTATTGTGATACTTCAGACAGTCATATTGAGATATTTCCCAAATGGAATGCCAACACTGATGGAAGTGTTAGATGTGCTCAAAAAGAACTAGGGGGTTGTGGTGGCTATGTATTGGAGCTTAGACGCATGCTTCCAAATGGGTGGATATCTAACTTGGAAGCCAAGTCTCGTCACATGCTAAAAAAGTTTTGCAAAACTGAACAAATGACTCTTCAGAAAGAAGCAGTATCAAGTTGCAATTCTATGATAAAAGCTGCTTTTAGAGATGGCAGTAATGACAATAACCTATACTATCCAGCTTCAAGTGACCTCATACAAGAAGGGCTAAGTCTCTTCCAAAAGCATTGGATTAATGGTGAACCAGTTATAGTTCGTGATGTTCTTAAACAGGGGACAGGTCTGAGTTGGGAGCCAATGGTAACCTGGCGAGCATTACGTGAAAATTTGGTTTCAGGGATCAGCTCAAATCTGTCAGAAGTGAAGGCCATTGATTGCCTGGCTTGTTGTGAGGTAGAAATTGACACTCGCAAGTTCTTTAAAGGTTATATGGAAGGAAGAACCTATAGCAATCTCTGGCCAGAGATGCTCAAGCTAAAAGACTGGCCCCCCTCTGACAAGTTTGAAGATCTTTTGCCCCGTCACTGTGATGAGTTTATCCGTTGCTTACCATTTCAAGAGTACAGTGATCCTCGAGTTGGAATCCTCAACCTTGCTGTAAAGTTGCCAGCCAATGTCCTAAAGCCTGACTTGGGTCCAAAAACGTATATTGCTTATGGGATTAAAGAAGAACTTGGCAGAGGAGATTCCGTAACCAAACTTCACTATGATATGTCAGATGCGGTGAATATTTTGACCCATACATCTGAGGTGATGTTAACTGATGAGCAGCACTCTGCTATTTCAATATTAAAGAAAGCACACAAGGCCCAAGATGAAAAAGAACGCCCTGCTCAAGATAGGGTTGCTGAATACCTGAATGAAGGACCTTACAAAGATTACAGAGAACAGAAAAAAGATAAGGAGAAGAGTAATACTGAGATCAATGAAAATATCATTCCAGATGAAGTGCCAGCTATCTCTAAAGGAACAACAGAAACTGGTGGTGCTCTTTGGGACATCTTTAGGAGAGAGGATGCTGAAAAGTTAGAAGCATATTTAATAAAACACTCTAAAGAATTTAGACATACTTATTATTCTCCGGTTGAACAGGTTGTCCATCCAATCCATGACCAATGTTTTTATTTGACTTTGGAGCACAAGAAGAAGCTGAAGGAGGAATTTGGTGTAGAACCTTGGACATTTGAGCAGAAACATGGGGAAGCAGTATTTATTCCTGCTGGATGCCCACACCAAGTCAGGAACCTCAAGTCATGCACAAAAGTTGCTGCAGACTTTGTGTCCCCAGAAAATGTCCATATATGTATGCGTTTAGCTGATGAGCTTCGTCAACTTCCTAAGAATCACAAGGCCAGAGAAGATAAACTTGAGATCAAGAAGATGATAGTCTATGCTGTTGACCAAGCTGTCAAAGAATTGGAAGCTTTGGTTAGATGTTCTTGA 4569 0.4053 MTTHTNRKPPHVFFFFLLFLLLIIIKAQGSCFSGCNLALASYYIWEGTNLTYISKLFGKTTSEILKYNPSVKNPDVIQSQTRLNAPFSCECLNGVFLGHTFSYTTQHSDTYKTIAKVDFSNLTTKEWVSRVNSYPPDQMPDNVKINVTINCSCGDRHVSKDYGLFLTYPLRQGEDLRAVAAVSGVPSELLQRYNPGSDFSAGNGLVFVPAKDENGNFPPLKLSGAIAGIAVGGAVGILLLALIVYVGRCRRKKVAEVSLLPIPGASEDQYSQLQQHGCGSSLDKTSESSVVASPRLTGITVDKSVEFSYEELAKATNDFIKANIIGQGGFGSVYYAELRNEKAAIKKMDMQASNEFLAELKVLTHVHHLNLVRLIGFCVEGSLFLVYEYIENGNLSQHLRGSGKDPLSWPARVQIALDAARGLEYIHEHTVPVYIHRDIKSANILIDKNFRAKVADFGLAKLTEYGSSSLQTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISSKEAIVKTNEPENESKGLVVLFEEVLGLSDPKEDLHKLVDPRLGDNYPLDSVFKMSQLGKACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVHLMSGSYIHYLAYDKARFVVIIMEYVFQRQGKSNQQTDDKLKFIRYSNSFEISKRQNHKYGYEKPKSGGEKDTLPRVKKSTALGRKVSVSLGEQSNQDIDKNPAKISRCSRDFGISKKRKVQEIHLHDITNSKSVREENILSKRKRHEAKKCLTTSNNKRKFEDNIMNSSSEDEEVFSLSKTKSRNKARKMDNMMETAQNSRKCHQCMKKDRAAFVPCTKCLKMYCVGCIKQWYPNMSIEDIAERCPFCRKNCNCNVCLRSRGMIKTSNRKITDSEKVQYLQYMINSLLPFMQQICEEQNQEQEIEAKIQGKSRSEIEIPQTPCGEDERIYCDHCAASIMDLYRSCPKCSFEICLSCCQEIRNGSITPRSEMKFQYVNRGYDYMHGGDPLPVYCDTSDSHIEIFPKWNANTDGSVRCAQKELGGCGGYVLELRRMLPNGWISNLEAKSRHMLKKFCKTEQMTLQKEAVSSCNSMIKAAFRDGSNDNNLYYPASSDLIQEGLSLFQKHWINGEPVIVRDVLKQGTGLSWEPMVTWRALRENLVSGISSNLSEVKAIDCLACCEVEIDTRKFFKGYMEGRTYSNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRCLPFQEYSDPRVGILNLAVKLPANVLKPDLGPKTYIAYGIKEELGRGDSVTKLHYDMSDAVNILTHTSEVMLTDEQHSAISILKKAHKAQDEKERPAQDRVAEYLNEGPYKDYREQKKDKEKSNTEINENIIPDEVPAISKGTTETGGALWDIFRREDAEKLEAYLIKHSKEFRHTYYSPVEQVVHPIHDQCFYLTLEHKKKLKEEFGVEPWTFEQKHGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENVHICMRLADELRQLPKNHKAREDKLEIKKMIVYAVDQAVKELEALVRCS* 1523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01095 1522 FunFam PTI1-like tyrosine-protein kinase 3 390 603 - -
Rops11g01095 1522 FunFam LysM receptor kinase 2 298 389 - -
Rops11g01095 1522 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 676 1518 IPR045109 GO:0032454|GO:0033169
Rops11g01095 1522 CDD STKc_IRAK 325 586 - -
Rops11g01095 1522 SMART serkin_6 319 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01095 1522 FunFam Transcription factor jumonji domain-containing protein 1096 1494 - -
Rops11g01095 1522 Coils Coil 1333 1353 - -
Rops11g01095 1522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Rops11g01095 1522 ProSiteProfiles Protein kinase domain profile. 319 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g01095 1522 CDD cupin_RmlC-like 1409 1457 - -
Rops11g01095 1522 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 810 880 IPR018866 -
Rops11g01095 1522 Gene3D Transferase(Phosphotransferase) domain 1 390 601 - -
Rops11g01095 1522 ProSiteProfiles Zinc finger RING-type profile. 815 861 IPR001841 -
Rops11g01095 1522 ProSiteProfiles LysM domain profile. 40 85 IPR018392 -
Rops11g01095 1522 SUPERFAMILY Clavaminate synthase-like 1114 1519 - -
Rops11g01095 1522 Gene3D Cupin 1100 1494 - -
Rops11g01095 1522 SMART cupin_9 1214 1485 IPR003347 -
Rops11g01095 1522 Pfam JmjC domain, hydroxylase 1372 1468 IPR003347 -
Rops11g01095 1522 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524
Rops11g01095 1522 Gene3D Phosphorylase Kinase; domain 1 292 389 - -
Rops11g01095 1522 Pfam Protein tyrosine and serine/threonine kinase 323 588 IPR001245 GO:0004672|GO:0006468
Rops11g01095 1522 SUPERFAMILY Protein kinase-like (PK-like) 299 589 IPR011009 -
Rops11g01095 1522 ProSiteProfiles JmjC domain profile. 1233 1485 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01095 Rops-Chr11 15988692 16014640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01095 17 616 Receptor kinase-like Gene Family AT3G21630 56.585 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Rops11g01095 PK_Tyr_Ser-Thr 6.6e-46 CL0016
TR Jumonji Rops11g01095 PK_Tyr_Ser-Thr 6.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01095 K15601 K21989 gmx:100801772 1222.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01095 11 15988692 16014640 Rops11g01095 11 15988692 16014640 ECH
Rops2g04696 2 85283772 85289397 Rops11g01095 11 15988692 16014640 PCT