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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Rops11g01080
ATGGCCACTTTAACCACTCTCCTAGTGTTCTCATGCTTTCTACCTACCTTAGCTTCAAAACTGAATGCAGATTCAACAAAGGTTCCCTATATTCCAAACTATAACCCCAATCCTGAGAATGTTGTCATGAACACAATAGACTCATGCTGGCGAGCCAAAACAAATTGGGCTTCAAACCGTCAATCCTTAGCTGATTGTGCAATTGGCTTTGGCAAAGATGCTATTGGAGGGAAATTTGGTGAAATATATGAAGTCACTGATCCCTCTGATGACCCCATAAACCCAAAACCAGGCACACTTCGTTATGGTGCAATCCAAACAACACCCCTTTGGATAACTTTCACCAAAGACATGGTTATCACACTAAAGAATGAGCTTATGGTGAATAGCTACAAGACCATTGATGGGAGAGGAGCCAAAGTGGAGATTGCAAATGGGCCTTGCATTACAATACAAGGTGTTAGCCATGTCATTATTCATGGTATTAGCATTCATGATTGTAAACCAGGTAAGGCTGCCATGGTGAGGAGTACTCCAGATCATGTTGGGCAACGTGAAGGCTCTGATGGAGATGCCATTAGTATATTTGCTTCATCAAATATCTGGATTGATCATTGCTTTTTGGCTCGTTGCACTGATGGTCTCATTGATGTTATACATGCCTCAACTGCAGTCACCATCTCAAACAATTACTTCACCCAGCATGATAAAGTGATGTTGCTAGGACACAACGATGAATACAGCGCGGATAAAATAATGAAAGTAACAGTAGCTTTCAACCGCTTTGCCAGTGGCCTAACTGAAAGGATGCCAAGGGTAAGATTTGGTTATGCCCATGTGGTCAACAACCGGTATGACGAGTGGCTCATGTATGCCATTGGTGGCAGTGCCGACCCAACCATTTTCAGTCAAGGGAACTACTTTATAGCTTCAAATGATTCTGCTGCAAAACAGGTTACTAAGAGGGAAACTAGTAAAAAGTGGAATAGTTGGAAATGGAGGACTTATGGGGATGAATTCATAAATGGTGCTTATTTTGTGCCATCTGGGTACGGAAGTTGTATCCCATCATATTCACCTGCTCAAAACTTTGTCGCAGCCCAAGCATCCATGGTGCCTTTATTAACACTCAATGCAGGGCCACTGGACTGTGTTCTTAATAAAGCATGTTAA
1173
0.4237
MATLTTLLVFSCFLPTLASKLNADSTKVPYIPNYNPNPENVVMNTIDSCWRAKTNWASNRQSLADCAIGFGKDAIGGKFGEIYEVTDPSDDPINPKPGTLRYGAIQTTPLWITFTKDMVITLKNELMVNSYKTIDGRGAKVEIANGPCITIQGVSHVIIHGISIHDCKPGKAAMVRSTPDHVGQREGSDGDAISIFASSNIWIDHCFLARCTDGLIDVIHASTAVTISNNYFTQHDKVMLLGHNDEYSADKIMKVTVAFNRFASGLTERMPRVRFGYAHVVNNRYDEWLMYAIGGSADPTIFSQGNYFIASNDSAAKQVTKRETSKKWNSWKWRTYGDEFINGAYFVPSGYGSCIPSYSPAQNFVAAQASMVPLLTLNAGPLDCVLNKAC*
391
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Rops11g01080
390
PRINTS
Pollen allergen Amb family signature
189
210
IPR018082
-
Rops11g01080
390
PRINTS
Pollen allergen Amb family signature
269
288
IPR018082
-
Rops11g01080
390
PRINTS
Pollen allergen Amb family signature
331
355
IPR018082
-
Rops11g01080
390
PRINTS
Pollen allergen Amb family signature
291
310
IPR018082
-
Rops11g01080
390
PRINTS
Pollen allergen Amb family signature
361
384
IPR018082
-
Rops11g01080
390
PRINTS
Pollen allergen Amb family signature
125
141
IPR018082
-
Rops11g01080
390
PRINTS
Pollen allergen Amb family signature
89
114
IPR018082
-
Rops11g01080
390
PRINTS
Pollen allergen Amb family signature
66
83
IPR018082
-
Rops11g01080
390
SUPERFAMILY
Pectin lyase-like
43
381
IPR011050
-
Rops11g01080
390
SMART
amb_all
117
314
IPR002022
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Rops11g01080
Rops-Chr11
15879985
15882328
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Rops11g01080
6
390
Polysaccharide Lyase
AT4G22080
67.092
0.0
550
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Rops11g01080
K01728
-
gmx:100803229
676.011
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Rops2g04705
2
85361338
85362810
Rops11g01080
11
15879985
15882328
PCT
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