Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops11g01077 | ATGTGCAAAGCAAGATCCGAAGGAGTTTCGGGCTTAGGCAGCACTGGGAAGCAATGTGAGTATGGTAGTAAGAAAGCAGGCTGGGGTTATCATAAGACAGGACCCAAAATGAAAATGGACGCGGCATTTGCACAAAGCCCATGTAGCTTTTGTTATGGGCTACTCTTGTTGGTGAACATGGGAAACAAGTTCAATGTGGTCGTGTCGTGTTTGTGTCTGTTGTTTTGTCTGGTCTCTTGTGCATCCAATGATGGATTGCGTAGGATTGGACTGAAAAAGATCAAATTGGGCTCCGAGGACCTTTTGGTGTCCAAGAATGCTGAGTCTTTACGGTCTTCCATTAGAAAGTGTCCCTTTCAAAACATCCTTGGAGCCACTGAGGATGCTGATGTTGTTGCACTCAAGAATTACTTGGATGCTCAGTACTATGGTGAAATTTCCATTGGTACCCCTCCTCAGAAATTCACTGTAATTTTTGACACGGGCAGCTCCAATATGTGGGTGCCATCAGCTAAATGTTACTTCTCGGTTGCATGCTACCTCCATGCCAAGTACAGGTCTAGCCAATCAAGTACCTACAGGGAAAATGGGACTTCTGCTGCAATTCAATATGGTACTGGAGCAATTTCTGGTTTCTTTAGCTATGACAATGTCAGAGTTGGTGACGTAGTTGTAAAGGACCAGGAATTTATTGAAGCAACTAGAGAGCCTGGAGTTACATTTGTGGCCGCTAAGTTCGATGGTTTGCTAGGACTTGGATTTCAAGAAATATCAGTTGGAAAGGCTGTTCCAGTGTGGTACAGTATGGTTAAACAAGGTCTTGTTAAGGAACCAGTATTTTCATTTTGGCTCAATCGTAATCAACAAGAAGAGGAAGGAGGTGAGATTGTTTTTGGTGGTGTTGATCCTGCTCACTTCAAGGGTAAACATACTTACGTGCCGGTGACACGAAAAGGATATTGGCAGTTTGACATGGGAGATGTACTTATTGGTGGTAAACCCACTGGATATTGTGCTAATGGTTGTTCAGCAATTGCAGACTCAGGGACATCTTTGTTGGCAGGTCCATCGACTGTGATTACTATGATAAATCAAGCAATTGGAGCATCTGGAGTTGTAAGCAAAGAATGCAAGTCCGTTGTTGAACAGTATGGACAAACAATCTTGGAATTGCTTGTGGCTGAAGCACAGCCAAAGAAGATCTGCTCCCAAATTGGATTGTGCACCTTTGATGGGACTCGTGGCGTTAGTATGGGTATCGAGAGTGTGGTGGATAAGAATGAAAGAAAATCATCCAATGGCTTTCGAGATGCTACTTGTTCTGCATGTGAGATGGCTGTTTTTTGGACGCAGAACCAGCTGAGGCAGAATCAGACACAAGATCGGATAATAAACTATATCAATGAGCTTTGTGATAAAATGCCTAACCCAATGGGACAATCAGCTGTTGACTGTGGAAAGATCCCTTCAATGCCTATTGTTTCCTTCACCATCGGCGGAAAGGTTTTTGACCTTGCCCCACAGGAGTACATACTGAAGGTGGGCGAAGGTGCTCAAGCCCAATGCATTAGTGGCTTTACTGCTTTGGATATTCCTCCTCCACGTGGCCCACTCTGGATCCTTGGAGATATCTTCATGGGACGCTATCACACAGTCTTTGATTATGGTAATCTGAGAGTGGGATTTGCCAAAGCAGCATAG | 1701 | 0.4421 | MCKARSEGVSGLGSTGKQCEYGSKKAGWGYHKTGPKMKMDAAFAQSPCSFCYGLLLLVNMGNKFNVVVSCLCLLFCLVSCASNDGLRRIGLKKIKLGSEDLLVSKNAESLRSSIRKCPFQNILGATEDADVVALKNYLDAQYYGEISIGTPPQKFTVIFDTGSSNMWVPSAKCYFSVACYLHAKYRSSQSSTYRENGTSAAIQYGTGAISGFFSYDNVRVGDVVVKDQEFIEATREPGVTFVAAKFDGLLGLGFQEISVGKAVPVWYSMVKQGLVKEPVFSFWLNRNQQEEEGGEIVFGGVDPAHFKGKHTYVPVTRKGYWQFDMGDVLIGGKPTGYCANGCSAIADSGTSLLAGPSTVITMINQAIGASGVVSKECKSVVEQYGQTILELLVAEAQPKKICSQIGLCTFDGTRGVSMGIESVVDKNERKSSNGFRDATCSACEMAVFWTQNQLRQNQTQDRIINYINELCDKMPNPMGQSAVDCGKIPSMPIVSFTIGGKVFDLAPQEYILKVGEGAQAQCISGFTALDIPPPRGPLWILGDIFMGRYHTVFDYGNLRVGFAKAA* | 567 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops11g01077 | 566 | Gene3D | Acid Proteases | 87 | 300 | IPR021109 | - | |
Rops11g01077 | 566 | Gene3D | - | 372 | 475 | - | - | |
Rops11g01077 | 566 | Pfam | Eukaryotic aspartyl protease | 141 | 565 | IPR033121 | - | |
Rops11g01077 | 566 | SUPERFAMILY | Acid proteases | 69 | 565 | IPR021109 | - | |
Rops11g01077 | 566 | CDD | phytepsin | 132 | 564 | IPR033869 | GO:0004190 | |
Rops11g01077 | 566 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 344 | 355 | IPR001969 | GO:0004190|GO:0006508 | |
Rops11g01077 | 566 | ProSiteProfiles | Peptidase family A1 domain profile. | 142 | 563 | IPR033121 | - | |
Rops11g01077 | 566 | ProSiteProfiles | Saposin B type domain profile. | 436 | 477 | IPR008139 | - | |
Rops11g01077 | 566 | FunFam | Vacuolar aspartic proteinase | 437 | 565 | - | - | |
Rops11g01077 | 566 | FunFam | Aspartic proteinase A1 | 372 | 475 | - | - | |
Rops11g01077 | 566 | PRINTS | Pepsin (A1) aspartic protease family signature | 148 | 168 | IPR001461 | GO:0004190|GO:0006508 | |
Rops11g01077 | 566 | PRINTS | Pepsin (A1) aspartic protease family signature | 294 | 307 | IPR001461 | GO:0004190|GO:0006508 | |
Rops11g01077 | 566 | PRINTS | Pepsin (A1) aspartic protease family signature | 344 | 355 | IPR001461 | GO:0004190|GO:0006508 | |
Rops11g01077 | 566 | PRINTS | Pepsin (A1) aspartic protease family signature | 539 | 554 | IPR001461 | GO:0004190|GO:0006508 | |
Rops11g01077 | 566 | Pfam | Saposin-like type B, region 1 | 439 | 475 | IPR007856 | GO:0006629 | |
Rops11g01077 | 566 | ProSiteProfiles | Saposin B type domain profile. | 372 | 412 | IPR008139 | - | |
Rops11g01077 | 566 | PANTHER | BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED | 74 | 564 | IPR001461 | GO:0004190|GO:0006508 | |
Rops11g01077 | 566 | Gene3D | Acid Proteases | 301 | 566 | IPR021109 | - | |
Rops11g01077 | 566 | FunFam | Lysosomal aspartic protease | 128 | 370 | - | - | |
Rops11g01077 | 566 | SUPERFAMILY | Saposin | 373 | 475 | IPR011001 | - | |
Rops11g01077 | 566 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 157 | 168 | IPR001969 | GO:0004190|GO:0006508 | |
Rops11g01077 | 566 | Pfam | Saposin-like type B, region 2 | 375 | 408 | IPR008138 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops11g01077 | Rops-Chr11 | 15835159 | 15842311 | Dispersed/Wgd |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops11g01077 | K08245 | - | gmx:100801598 | 861.292 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops11g01077 | 11 | 15835159 | 15842311 | Rops11g01077 | 11 | 15835159 | 15842311 | ECH | |
Rops2g04707 | 2 | 85403130 | 85405877 | Rops11g01077 | 11 | 15835159 | 15842311 | PCT |