Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01051 ATGAAAGGTGAAGCTGAGAGCTTCATAAAAGGGTCCCCAACTCCAACTGTGTATTCTTCTTCTCTAATTAGCAGTGTTGTTGATAACCCTTCACACCCATCTGAGTTGAGACCTAGTCGCCGGCGTTTTGATTCTCATCTTTCAGAGATAAGCCTGAAAACGCCTATGGTTAGACCTTATGTTCGATCAAAAATGCCTCGGCTTCGTTGGACACCAGATCTCCATCGTTGCTTTGTGCATGCAGTTCAAAGGCTTGGAGGAGAAGATCGGGCCACGCCAAAGTTGGTTTTACAGCTAATGAATGTAAAGGGGCTTACTATATCTCATGTTAAAAGCCACCTTCAGATGTACAGGAGCATGAAGCACGAGCAGATGTGTCAAGTAAAGAAGAATGATCTGGCACCAGAATTCTCAGCTTCGACATTCTCCTCAACCTTTGGCCCAAGCTACGGCCAACGGAACTGCGGAACTCATACGGAAGAGCTTTCTAGCCCCCAAGCTCAACGGAGTCCTCATGAGCAGGAGTCTAGCAATGGAAACCAGAGGAGTGAATCGATTATAATTTGTAACGATGATGAACAAAAGATGCACACCTACATCATCTTCGAGGATCTTCTCAGAAGCCAGACTGTCCAAGAGAACAAAAATCCTACTGAAAAGGTGTCACTAGGGGCTGCTGGTTACAAAAGCGACCATCAAAGATTTGAAGATATAAACGCGATTGGAGAGAGAGTGGATAAGGACATACTGTCCCTGTCAATGAGCTCAAGAGGTTCAAATCCATTCTTGAATCGGGGCGAAACAAGTCCAGATACCAATGATGTCTCTCTTGAGCTCACGCTCGCTTAA 849 0.4535 MKGEAESFIKGSPTPTVYSSSLISSVVDNPSHPSELRPSRRRFDSHLSEISLKTPMVRPYVRSKMPRLRWTPDLHRCFVHAVQRLGGEDRATPKLVLQLMNVKGLTISHVKSHLQMYRSMKHEQMCQVKKNDLAPEFSASTFSSTFGPSYGQRNCGTHTEELSSPQAQRSPHEQESSNGNQRSESIIICNDDEQKMHTYIIFEDLLRSQTVQENKNPTEKVSLGAAGYKSDHQRFEDINAIGERVDKDILSLSMSSRGSNPFLNRGETSPDTNDVSLELTLA* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01051 282 MobiDBLite consensus disorder prediction 148 184 - -
Rops11g01051 282 MobiDBLite consensus disorder prediction 256 282 - -
Rops11g01051 282 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 53 182 IPR046955 GO:0003700
Rops11g01051 282 FunFam Myb family transcription factor 64 122 - -
Rops11g01051 282 NCBIfam myb-like DNA-binding domain, SHAQKYF class 66 120 IPR006447 GO:0003677
Rops11g01051 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 122 IPR017930 -
Rops11g01051 282 SUPERFAMILY Homeodomain-like 64 120 IPR009057 -
Rops11g01051 282 Gene3D - 65 123 - -
Rops11g01051 282 Pfam Myb-like DNA-binding domain 68 118 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01051 Rops-Chr11 15457036 15460214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01051 57 123 G2-like Transcription Factor Family AT2G42660 79.104 7.73e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Rops11g01051 Myb_DNA-binding 1.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01051 - - gmx:100798980 338.191