Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01017 ATGATCTCTTCGGTGAGGTGTACAGCATCATCTCTCACCAGCTCTGCTTTCTCAAACACAAAGCTTCCTGTCCCAAGGCCTCAACTTTTCACATTACCCACCATTCAGAATGTTGAACAAAACACGGGTCTGTGTTCCCGGAAACCTCTTTACCTTTCTTCCACAGAGAACTTGGCATTGTTGACAAAACCCAGAAGAAGGAACTTGACAGAGTGTCAGGCCTATGAGGCTGATAGGTCAAGGCCACTTGAGATTAACATTGAGCCGCCTAGTCAAGAGGCAGCTCAGAGGCTCAAGATTGGGTTGTATTTTGCTACTTGGTGGGCTTTGAATGTGGTCTTCAATATATACAACAAGAAAGTTTTGAATGCTTTTCCTTACCCCTGGCTTACTTCCACTTTGTCCCTTGCTGCTGGCTCTCTCATGATGTTAATCTCGTGGGCCACAAGAGTTGCTGATGTCCCAAAAGTTAATTTGGACTTCTGGAAAGCCCTGTTTCCTGTTGCGGTGGCACACACAATTGGACATGTTGCTGCAACTGTGAGCATGTCCAAAGTTGCAGTTTCATTCACTCACATTATCAAGAGTGGAGAGCCTGCTTTCAGTGTCCTGGTATCAAGGTTCTTGCTTGGAGAAGCATTCCCTATGCCGGTTTACCTCTCACTGGTGCCAATTATTGGTGGTTGTGCACTAGCTGCTGTCACGGAGCTCAATTTCAATATGATTGGCTTCATGGGGGCTATGATATCAAATTTGGCATTTGTCTTCCGGAATATATTCTCAAAGAAGGGGATGAAGGGAACGTCTGTTAGTGGAATGAACTACTATGCTTGTCTTTCCATGTTGTCTCTATTAATCCTCACACCTTTTGCCATTGCTGTGGAGGGTCCCAAGGTTTGGGCTGCAGGCTGGCAAACAGCTGTGTCTCAGATTGGTCCCAATTTTGTATGGTGGGTAGCTGCCCAGAGTGTCTTCTACCACTTGTATAATCAAGTCTCATACATGTCTCTGGATCAGATTTCTCCCTTGACATTTAGCATAGGGAACACAATGAAGAGAATTTCGGTAATTGTCTCTTCCATCATTATCTTTCACACACCAGTTCAGCCCATCAACGCTCTTGGGGCAGCCATAGCAATTCTTGGCACCTTCCTCTATTCACAGGCTAAACAGTAA 1176 0.4532 MISSVRCTASSLTSSAFSNTKLPVPRPQLFTLPTIQNVEQNTGLCSRKPLYLSSTENLALLTKPRRRNLTECQAYEADRSRPLEINIEPPSQEAAQRLKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLMMLISWATRVADVPKVNLDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPMPVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGTSVSGMNYYACLSMLSLLILTPFAIAVEGPKVWAAGWQTAVSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01017 391 Pfam Triose-phosphate Transporter family 98 387 IPR004853 -
Rops11g01017 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 140 234 - -
Rops11g01017 391 PANTHER SOLUTE CARRIER FAMILY 35 99 390 - -
Rops11g01017 391 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 98 390 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01017 Rops-Chr11 14732829 14735803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01017 29 391 Antiporters AT1G61800 79.121 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01017 K15283 K05350 gmx:100804205 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01017 11 14732829 14735803 Rops9g00388 9 5225106 5229306 ECH
Rops11g01017 11 14732829 14735803 Rops11g01017 11 14732829 14735803 ECH
Rops2g04745 2 86058876 86062077 Rops11g01017 11 14732829 14735803 PCT