Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00991 ATGTCTCACATAACTGTGGAGAGGAACAGGAGAAGACAGATGAATGAACATCTCAAAGTTTTAAGGTCGTTGACCCCATGTTTCTATATTAAAAGGGGAGATCAAGCATCTATAATAGGTGGAGTTATAGAATTCATCAAGGAGTTGCACCAAGTTCTTCAAGCTTTGGAGTCCCAGAAAAGAAGAAAGAGTTTAAGCCCTAGCCCTGGTCCGAGTCCAAGAACACTGCAGCCAACTTTTCATCCATTTGATAGTTCTTCCATAATTGGGACTAATTCTTTCAAGGAACTAGGAGCAAGCTGTAACTCTTCTGTTGCGGATGTAGAAGTGAAAATATCGGGCTCAAATGTGATTTTGAGGGTAATTTCACAGAGAATTCCTGGTCAAGTTGCAAAGATCATAACTGTTTTGGAAAGTCTTTCATTTGAAGTCCTTCATCTGAACATCAGTAGCATGGACGAGACTGTCCTATTCCAATTTGTTGTCAAGATAGAGCTGGGATGTCAACTAAGTCTGGAGGAACTTGCAATGGAAGTACAACAAAGCTTCTGCTCAGAGGCTATGAAGTTAACTGCACTGTGA 582 0.4072 MSHITVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVLQALESQKRRKSLSPSPGPSPRTLQPTFHPFDSSSIIGTNSFKELGASCNSSVADVEVKISGSNVILRVISQRIPGQVAKIITVLESLSFEVLHLNISSMDETVLFQFVVKIELGCQLSLEELAMEVQQSFCSEAMKLTAL* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00991 193 Gene3D - 1 64 IPR036638 GO:0046983
Rops11g00991 193 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Rops11g00991 193 SMART finulus 4 55 IPR011598 GO:0046983
Rops11g00991 193 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Rops11g00991 193 PANTHER TRANSCRIPTION FACTOR FAMA 1 183 IPR044283 GO:0003700|GO:0010052
Rops11g00991 193 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 68 IPR036638 GO:0046983
Rops11g00991 193 MobiDBLite consensus disorder prediction 60 79 - -
Rops11g00991 193 FunFam Transcription factor MUTE 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00991 Rops-Chr11 14159327 14160937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00991 1 186 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 67.692 2.28e-86 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Rops11g00991 HLH 1.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00991 - - gmx:100810771 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00991 11 14159327 14160937 Rops11g00991 11 14159327 14160937 ECH