Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00982 ATGCCCATGGAATCCTTATTTCACCATCACAATAATAAGGATAAGGTGGTAGTCATAATGGGGGCCACGGGCACCGGCAAGACCAAGTTGGCCATAGACGTGGCCAAACATTTCCAACCAGCAGAGATAGTGAACTCAGACAAAATGCAAGTTTACAAAGGTCTTGACATCACAACCAATAAGGTTACAGAACAAGAGTGTGGTGGGGTCCCCCACCATCTTTTAGGAATGGTTGATCCTAACTCAAATTTCACTGCCAATGACTTTTGTCGTGAGGCTTGTTTGGCTATTGATTCCATCGTTGGAAGGGATGGGTTACCCATAATTGCTGGGGGCTCCAATTCTTACTTAGATGCTTTGGTGAACCATCACAAAGAGTTTAGGTTAAGGTACCAGTGTTGTTTCCTCTGGGTTGATGTGTCACTCCCTGTGCTCCATTCTTCCCTTCAAGCACGTGTGGATCGAATGATTAAAGCTGGGCAAGTTGATGAAGTTCGTGAATTCTTTGATCCTTTTGCTGATTACACTAAAGGGATTAGAAGAGCTATTGGAGTGCCTGAATTTGATGATTTTCTAAGAGCAGAGTCAAATTCAGCCGATGAAAGAACCAAAAAGAGGCTCCTTGAGGCTGCCATTGCTAGGATCAAAATTAATAACTGTACACTTGCAAATCGACAGCTCCAAAAGATCCATCGTCTTCATGGTTTGTGGAAAAGGAACATGTACCGTCTTGATGCTACTGAGGTATTCCTAAGCAGTGGTTGTGCTTGTGAGAAAGCTTGGGAGGATCATGTTCGAGCACATAGCCTCATAATCCTTCACAACTTCCTCTACAAGGAAAAACATGTTCCCACCGGAATTCTCTCCCCAAAAGATGTAATCGCTGCCGTTTCTAAGCCACCGCCGGTGGCATTTCCCGCCGTGGCGGCGGCAAGCCATTAG 942 0.4512 MPMESLFHHHNNKDKVVVIMGATGTGKTKLAIDVAKHFQPAEIVNSDKMQVYKGLDITTNKVTEQECGGVPHHLLGMVDPNSNFTANDFCREACLAIDSIVGRDGLPIIAGGSNSYLDALVNHHKEFRLRYQCCFLWVDVSLPVLHSSLQARVDRMIKAGQVDEVREFFDPFADYTKGIRRAIGVPEFDDFLRAESNSADERTKKRLLEAAIARIKINNCTLANRQLQKIHRLHGLWKRNMYRLDATEVFLSSGCACEKAWEDHVRAHSLIILHNFLYKEKHVPTGILSPKDVIAAVSKPPPVAFPAVAAASH* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00982 313 FunFam Adenylate isopentenyltransferase 5, chloroplastic 142 241 - -
Rops11g00982 313 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 142 241 - -
Rops11g00982 313 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 13 276 IPR039657 -
Rops11g00982 313 Gene3D - 13 277 IPR027417 -
Rops11g00982 313 Pfam IPP transferase 50 124 - -
Rops11g00982 313 Pfam IPP transferase 127 228 - -
Rops11g00982 313 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 173 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00982 Rops-Chr11 14015102 14016360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00982 130 280 C2H2 Transcription Factor Family AT2G27760 33.333 9.04e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00982 K10760 - gmx:100812928 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00982 11 14015102 14016360 Rops11g00982 11 14015102 14016360 ECH
Rops2g04768 2 86408738 86410446 Rops11g00982 11 14015102 14016360 PCT