Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00971 ATGCTTCCTGATCAGAGAAAAAAGTCATCTGTGGATGTAGATTTCTTTACTGAATACGGTGAAGGGAGCAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCTATAAAGAAAATTAATGACATATTTGAACATGTTTCCGATGCCACTCGCATTCTACGTGAGATTAAGCTTCTTAGACTTTTACGTCATCCGGATATTGTGGAGATCAAGCATATTTTGTTACCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTTTTTGAACTCATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATCTGACACCAGAGCATTACCAGTTTTTCCTCTATCAGCTTCTTCGTGGCATGAAGTATATACATACAGCAAATGTTTTTCACCGAGATTTAAAGCCGAAAAACATTTTGGCAAATGCTGACTGCAAACTGAAGATTTGTGACTTTGGTCTTGCCAGAGTGGCTTTTAATGATACACCCACTGCTATATTCTGGACAGATTATGTTGCAACAAGGTGGTATAGGGCTCCAGAGTTGTGTGGATCCTTTTTCTCCAAGTATACACCAGCTATAGACATATGGAGCATTGGCTGCATTTTCGCAGAGCTTTTAACCGGAAAACCTCTTTTCCCTGGGAAGAATGTTGTCCATCAACTGGACCTCATGACTGATCTTCTTGGAACACCATCTCCTGAAGCCATTGCTAGGGTGCGAAATGAGAAAGCTCGGAGATACTTGAGCAGCATGCGTAAAAAGAAGCCAGTTCCTTTCTCGCAAAAATTTCCTAATGCAGACCCCCTTGCTCTTCGATTGTTAGAAAGAATGCTGGCATTTGAGCCTAAGGATCGGCCTACTGCCGAAGAGGCCCTAGCAGATCCATATTTTAAAGGCTTGGCCAAGGTTGAGAGAGAACCTTCTGCTCAGCCAGTTACCAAGATGGAATTTGAATTTGAGAGACGCAGAATAACAAAGGAAGATGTACGAGAACTTATATACCGAGAGATTCTGGAGTACCATCCAAAGATGTTAAAGGAATTTCTAGAGGGAGCAGAGCCAACAGGATTCATGTATCCAAGTGCTGTGGACCACTTCAAGAAGCAATTTGCATATCTTGAGGAGCATTATGGCAAAGGGGGAACTGTTGCTCCACCTGAGAGACAACATGCATCATTACCCAGACCATGTGTCTTGTATTCTGATAACTCAATACAGAATACAGCTGAGGTTGCAGATGATCTATCCAAATGTTGCATCAAAGAAGTTGAGAAATCACCCATAGATAGGAGTAGTGCTATCCCTATGACTCGGCTTCCTTTACAAGCTCCTCAAAATATTCAAGGTGTTGCTGCGAGGCCAGGAAAAGTTGTTGGTTCAGTAATGCGTTACAACAACTGTGGGGTGACTGTGACGGCAGACGCTGAACAGCGGAGGGTGGTTAGGAATCCATCCGTTTCAGCTCAGTATGCTGCGTCGAGCTGTTCTTATCCTAGGAGAAACCCAAGCTATAAAAATGACAGGGCAGAAGATGATGGGATTGAAGGTTCTAATGGACTGCAGCCAAAGCCTCAATACATGGCTAGAAAAGTTGCTGCTGCTCAAGGTGGATCTGGTGGTCAATGGTATTGA 1689 0.4263 MLPDQRKKSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGMKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPVPFSQKFPNADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVAPPERQHASLPRPCVLYSDNSIQNTAEVADDLSKCCIKEVEKSPIDRSSAIPMTRLPLQAPQNIQGVAARPGKVVGSVMRYNNCGVTVTADAEQRRVVRNPSVSAQYAASSCSYPRRNPSYKNDRAEDDGIEGSNGLQPKPQYMARKVAAAQGGSGGQWY* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00971 562 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Rops11g00971 562 MobiDBLite consensus disorder prediction 510 544 - -
Rops11g00971 562 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Rops11g00971 562 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Rops11g00971 562 FunFam Mitogen-activated protein kinase 15 119 - -
Rops11g00971 562 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 340 - -
Rops11g00971 562 FunFam Mitogen-activated protein kinase 111 339 - -
Rops11g00971 562 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Rops11g00971 562 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Rops11g00971 562 CDD STKc_TDY_MAPK 24 361 - -
Rops11g00971 562 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00971 562 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00971 562 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00971 Rops-Chr11 13852301 13858381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00971 1 562 MAP Kinase Gene Family AT5G19010 79.965 0.0 942
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Rops11g00971 Pkinase 6.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00971 - - gmx:100781957 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04777 2 86543564 86550233 Rops11g00971 11 13852301 13858381 PCT