Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00962 ATGATTGTAAAGGAGCATCCTGTTGGTACTGAACTGGCAATGAATAATGCTACTGGGGAGGAGGAAATAGATTTTGCTTGTGAGCCATACATAGGGTTAGAATTTTATTCCGCAGATGAGGCACTTAAGTTTTACACATCATATGCTATTCGAATGGGATTTAAAGTTCGGATTGGTCAGCTTTATAGATCAAGAACTGATGGTTCGGTTTCTTCTCGAAGATTTGTGTGTTCAAAGGAGGGATATCAGCTCAGTTCAAGAACAGGCTGTCCGGCATTCATAAGGGTACAAATAAATGCTTCTGGAAAGTGGGTTATTGATCATTTTCATAAGGACCATAATCACATTCTTGAAACCGAAAGTGAAAATTGCACTCCAACATTGCAGCAGAAAGATGTTATAACTAGCAATTCTTTTACTGAAGTACCTCGCAGGCCAAGGAAGAAAATGCTTGAAGAAGCCAATGATGAACCCACTTGTCCCTTTGGCATTATTGATTTCAAGCACCTGAGAAAGGAAAAACTTGAAGGACCGCCCAGAATTGAACCATATATTGGTCAAGAGTTCAGTTCTCCCAATGAAGCCTACCAATTTTATCATGCATATGCAGCATATATGGGTTTTAGAATTCGAATTGGTCAGTTGTTTCGTTCTAAGAATGATGGGCTGATTGCATCTCGCCGATTTGTGTGCTCAAAAGAGGGGTTCCAGCACCCTTCAAGAGTTGGTTGTAGGGCTTATTTAAGGATTAAGCGACAACAATCAGAAAAGTGGGTAGTAGACCGTTTCAGAAAAGATCATAATCATGATCTGGACTCTGAAAAGGAGGGTCCGGTAAAAAGTCTTGCTGCTTCTAATATTTTGACTGAGGAGGTAAATTCTGGATTGGTAAATGGTGACTTATTTAGGATAGACAACTACCCTGTTCCTAGAGGAGGTAGACAAAATCACATTAGAAGTGATTGGTACAGTATGCTTTTAGAGTATTTTCAATCAAGACAAGCAGAAAATACAGGATTCTTTTATGCTGTGGAAGTTGATAATGGTAATTGCATGAGCATATTTTGGGCTGATGGCAGATCTAGATATTCATGTAGTCAGTTTGGTGATGTCCTTGTTATAGACACATCATATCGAAAAAGTGTCTATTTGGTGCCATTTGCTACTTTTGTTGGAGTTAACCATCACAAGCAACCTGTGCTTCTTGGATGTGCTCTAATTGCTGATGAATCTGAAGAGTCTTTCACTTGGTTGTTTCGAACATGGCTGAGGGCAATGGCTGGCCGGCAGCCTCTGTCAATAATAGCTGATCAAGACATTGCAATCCAAAGGGCAATAACTAAAGTCTTTCCGGTAACCCATCATCGCTTCTCGTTGTGGCAAATTAAGGCAAAGGAACAAGAGAATGTGGGCCTGATGGGTAATGGATTTACAAGAGATTATGAAAAGTGCATTTATCAGAGTCAGACAGTTGATGAATTTGACACCACATGGAATGCCCTACTCAACAAATATGGACTGAAGGACAATGCTTGGCTAAAAGAAATGTATGAGAAGCGTGCATCCTGGGTTCCATTATATTTAAAGGGCACATTTTTTGCTGGAATTCCCATGAACGAAAGCGTGGATTCATTCCTTGGTGCACTTTTAAATGCCCAGACTCCTCTCACAGAGTTCATTCCACGGTATGAACGATGTCTTGAGCGACGCCGTGAGGAAGAAAGAAAAGAGGACTTTAATACTTCTAATTTTCAACCCTTTTTGCAAACAAAAGAACCGGTAGAAGAACAATGTAGAAGGCTTTACACTCTTGCGGTGTTCAAAGTATTTCAAAAAGAGCTCTTACAGTGCTATAGTTATCTCGGATTAAAAATATATGAAGAAGGGGGCCTCAGCAGATATTTGGTGCGTAAGTGTGGAAATGATATGGAGAAGCATGTAGTTACCTTTAATGCATCCAATCTCAGCATTAGTTGTAGCTGTCAGATGTTTGAATATGATGGTGTTCTTTGTAGACATGCGTTGAGGGTTTTCCAGATTGTGGAATTGAGAGAAGTTCCTTCCCGTTACATCTTGCACCGATGGACAAGAAATGGTGAGGATGGTGTTTTTCCTGACATAGAATCATGTAGTAACTCTCAGGAACTCAAAAATTTGATGTTGTGGAGTCTAAGAGAAGCTGCATCTAAATACATAGATGCTGGTGCAACATCCATTGACAAGTATAAACTTGCCTATGAAATTTTGCGAGAGGGTGGGAAAAAGCTATGTTGGCACAGGTGA 2283 0.4012 MIVKEHPVGTELAMNNATGEEEIDFACEPYIGLEFYSADEALKFYTSYAIRMGFKVRIGQLYRSRTDGSVSSRRFVCSKEGYQLSSRTGCPAFIRVQINASGKWVIDHFHKDHNHILETESENCTPTLQQKDVITSNSFTEVPRRPRKKMLEEANDEPTCPFGIIDFKHLRKEKLEGPPRIEPYIGQEFSSPNEAYQFYHAYAAYMGFRIRIGQLFRSKNDGLIASRRFVCSKEGFQHPSRVGCRAYLRIKRQQSEKWVVDRFRKDHNHDLDSEKEGPVKSLAASNILTEEVNSGLVNGDLFRIDNYPVPRGGRQNHIRSDWYSMLLEYFQSRQAENTGFFYAVEVDNGNCMSIFWADGRSRYSCSQFGDVLVIDTSYRKSVYLVPFATFVGVNHHKQPVLLGCALIADESEESFTWLFRTWLRAMAGRQPLSIIADQDIAIQRAITKVFPVTHHRFSLWQIKAKEQENVGLMGNGFTRDYEKCIYQSQTVDEFDTTWNALLNKYGLKDNAWLKEMYEKRASWVPLYLKGTFFAGIPMNESVDSFLGALLNAQTPLTEFIPRYERCLERRREEERKEDFNTSNFQPFLQTKEPVEEQCRRLYTLAVFKVFQKELLQCYSYLGLKIYEEGGLSRYLVRKCGNDMEKHVVTFNASNLSISCSCQMFEYDGVLCRHALRVFQIVELREVPSRYILHRWTRNGEDGVFPDIESCSNSQELKNLMLWSLREAASKYIDAGATSIDKYKLAYEILREGGKKLCWHR* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00962 760 Pfam SWIM zinc finger 653 679 IPR007527 GO:0008270
Rops11g00962 760 Pfam MULE transposase domain 371 464 IPR018289 -
Rops11g00962 760 Pfam FAR1 DNA-binding domain 197 271 IPR004330 -
Rops11g00962 760 Pfam FAR1 DNA-binding domain 43 117 IPR004330 -
Rops11g00962 760 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 17 124 IPR031052 GO:0006355
Rops11g00962 760 SMART 26again6 657 684 IPR006564 GO:0008270
Rops11g00962 760 ProSiteProfiles Zinc finger SWIM-type profile. 646 682 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00962 Rops-Chr11 13747156 13750177 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops11g00962 MULE 7.7e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00962 - - gmx:100816656 1347.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00962 11 13747156 13750177 Rops11g00962 11 13747156 13750177 ECH